Pipeline for NeuroImaging
Go to the Wiki page or go to http://mrhunsaker.github.io/NeuroImaging_Codes/ to get to the wiki for my neuroimaging pipelines.
I try to focus as much as possible on free, open source command line tools that are based on ITK and VTK libraries.
There is a lot of work yet to do so I will be regularly updating this wiki page to reflect my personal state of the art for my imaging methods.
Please feel free to contact me at mrhunsaker @ icloud.com if there are any questions