Releases
0.3.0
Added
DatasetReader
class for reading collections of pod5 files
Return index errors when querying invalid errors from API's
Added compression status to pod5 inspect summary <file>
Added environment override POD5_DISABLE_MMAP_OPEN
to force non-mmapped opening of files.
Changed
Transfers dataframes used in subsetting / filter use categorical fields to reduce memory consumption
Polars version increased to ~=0.19
Documentation regarding positional arguments
Recursive search for files now traverses symbolic links and ignores hidden files
Write pod5 files using DirectIO on Linux platforms (performance)
Fixed
Fixed a bug in the build scripts that prevented iOS and Windows Conan packages from being uploaded.
convert to_fast5
writes byte encoded read_ids to match MinKNOW (was str
)
Corrected the visibility of dependencies when building pod5 as a shared library.
num_minknow_events
field description from int8
to uint64
ReadRecord.num_minknow_events
return type-hint from float
to int
Removed
Removed python3.7 support
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