refresh-extdata #375
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on: | |
schedule: | |
- cron: '0 6 * * 1' | |
pull_request: | |
branches: | |
- main | |
paths-ignore: | |
- .github/workflows/R-CMD-check.yml | |
- .github/workflows/refresh-extdata.yml | |
workflow_dispatch: | |
name: refresh-extdata | |
jobs: | |
render: | |
name: refresh-extdata | |
runs-on: ${{ matrix.config.os }} | |
strategy: | |
fail-fast: false | |
matrix: | |
config: | |
- {os: ubuntu-latest, r: 'release'} | |
env: | |
R_REMOTES_NO_ERRORS_FROM_WARNINGS: true | |
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | |
steps: | |
- uses: actions/checkout@v4 | |
with: | |
fetch-depth: '0' | |
clean: 'false' | |
- name: Get branch name (manual) | |
if: github.event_name != 'pull_request' | |
shell: bash | |
run: echo "BRANCH_NAME=$(echo ${GITHUB_REF#refs/heads/} | tr / -)" >> $GITHUB_ENV | |
- name: Get branch name (pull request) | |
if: github.event_name == 'pull_request' | |
shell: bash | |
run: echo "BRANCH_NAME=$(echo ${GITHUB_HEAD_REF} | tr / -)" >> $GITHUB_ENV | |
- name: Configure git | |
run: | | |
git config user.email "github-actions@github.com" | |
git config user.name "SoilKnowledgeBot" | |
git pull --no-rebase origin ${{ env.BRANCH_NAME }} | |
echo ${{ env.BRANCH_NAME }} | |
- uses: r-lib/actions/setup-r@v2 | |
with: | |
r-version: ${{ matrix.config.r }} | |
- uses: r-lib/actions/setup-pandoc@v2 | |
- uses: r-lib/actions/setup-r-dependencies@v2 | |
with: | |
extra-packages: any::rcmdcheck, any::remotes, any::pdftools, any::rvest, any::xml2, any::aqp, any::soilDB, any::data.table, any::R.utils, any::terra | |
needs: check | |
- name: Install SoilKnowledgeBase | |
run: | | |
sudo apt install poppler-utils | |
cd .. | |
R CMD build SoilKnowledgeBase | |
R CMD INSTALL SoilKnowledgeBase | |
cd SoilKnowledgeBase/ | |
- name: Install Rmarkdown | |
run: Rscript -e 'install.packages("rmarkdown")' | |
- name: Render README | |
run: Rscript -e 'rmarkdown::render("README.Rmd")' | |
- name: Post-processing | |
run: | | |
Rscript misc/OSD-error-reporting/typical-pedon.R | |
Rscript misc/OSD-error-reporting/osd-sections.R | |
- name: Commit results | |
run: | | |
git add inst/extdata/\*.txt | |
git commit -m 'Update inst/extdata/ TXT files' || echo "No changes to commit" | |
# git add inst/extdata/\*.html | |
# git commit -m 'Update inst/extdata/ HTML files' || echo "No changes to commit" | |
git add inst/extdata/\*.json | |
git commit -m 'Update inst/extdata/ JSON files' || echo "No changes to commit" | |
git add inst/extdata/\*.csv | |
git commit -m 'Update inst/extdata/ CSV files' || echo "No changes to commit" | |
git commit README.md -m 'Render README.Rmd' || echo "No changes to commit" | |
- name: Push results | |
run: | | |
git push origin HEAD:${{ env.BRANCH_NAME }} || echo "No changes to commit" | |
- name: Upload snapshot to release | |
if: github.ref == 'refs/heads/main' && hashFiles('inst/extdata/NSSH/NSSH.pdf') != '' | |
uses: svenstaro/upload-release-action@v2 | |
with: | |
repo_token: ${{ secrets.GITHUB_TOKEN }} | |
file: inst/extdata/NSSH/NSSH.pdf | |
tag: snapshot | |
file_glob: true | |
overwrite: true | |
body: "Download the National Soil Survey Handbook (NSSH) as a single PDF. This PDF is built weekly from the latest eDirectives sources." |