UPDATE JUNE 7 2021 The registration code was updated for faster and smoother navigation in the graphical interface and to integrate automatically scans acquired in different orientations.
IMPORTANT New version of the dataset with updated metadata information
Whole-brain functional ultrasound imaging in awake head-fixed mice. Clément Brunner, Micheline Grillet, Alan Urban, Botond Roska, Gabriel Montaldo & Emilie Macé. Nature Protocols 2021 https://doi.org/10.1038/s41596-021-00548-8
Follow instruction provided in the "MiniScan_Manual_v2.0.pdf" file.
Download the last version of the dataset in the Zenodo repository: http://doi.org/10.5281/zenodo.4905862
Allen Mouse Common Coordinate Framework (CCF) https://github.com/cortex-lab/allenCCF See Wang, Ding, Li et al., Cell, 2020 https://doi.org/10.1016/j.cell.2020.04.007
© 2015 Allen Institute for Brain Science. Allen Mouse Brain Atlas (2015) with region annotations (2017). Available from: http://download.alleninstitute.org/informatics-archive/current-release/mouse_ccf/annotation/ See Allen Mouse Common Coordinate Framework Technical White Paper for details http://help.brain-map.org/download/attachments/8323525/Mouse_Common_Coordinate_Framework.pdf?version=3&modificationDate=1508178848279&api=v2