Compute pairwise distances #1647
Workflow file for this run
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: tests | |
| on: | |
| push: | |
| branches: | |
| - '*' | |
| tags: | |
| - '*' | |
| pull_request: | |
| merge_group: | |
| jobs: | |
| linting: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: neuroinformatics-unit/actions/lint@v2 | |
| manifest: | |
| name: Check Manifest | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: neuroinformatics-unit/actions/check_manifest@v2 | |
| test: | |
| needs: [linting, manifest] | |
| name: ${{ matrix.os }} py${{ matrix.python-version }} | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| matrix: | |
| # Run all supported Python versions on linux | |
| python-version: ["3.10", "3.11", "3.12"] | |
| os: [ubuntu-latest] | |
| # Include 1 Intel macos (13) and 1 M1 macos (latest) and 1 Windows run | |
| include: | |
| - os: macos-13 | |
| python-version: "3.11" | |
| - os: macos-latest | |
| python-version: "3.11" | |
| - os: windows-latest | |
| python-version: "3.11" | |
| steps: | |
| - name: Cache Test Data | |
| uses: actions/cache@v4 | |
| with: | |
| path: | | |
| ~/.movement/* | |
| key: cached-test-data | |
| enableCrossOsArchive: true | |
| - name: Set up Conda | |
| uses: conda-incubator/setup-miniconda@v3 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| auto-update-conda: true | |
| channels: conda-forge,nodefaults | |
| activate-environment: movement-env | |
| - uses: neuroinformatics-unit/actions/test@v2 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| secret-codecov-token: ${{ secrets.CODECOV_TOKEN }} | |
| build_sdist_wheels: | |
| name: Build source distribution | |
| needs: [test] | |
| if: github.event_name == 'push' && github.ref_type == 'tag' | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: neuroinformatics-unit/actions/build_sdist_wheels@v2 | |
| upload_all: | |
| name: Publish build distributions | |
| needs: [build_sdist_wheels] | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: neuroinformatics-unit/actions/upload_pypi@v2 | |
| with: | |
| secret-pypi-key: ${{ secrets.TWINE_API_KEY }} |