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Better ini error message when ini file is not in the run folder #221

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merged 1 commit into from
May 27, 2016
Merged

Better ini error message when ini file is not in the run folder #221

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15 changes: 10 additions & 5 deletions pypreprocess/nipype_preproc_spm_utils.py
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Original file line number Diff line number Diff line change
Expand Up @@ -1519,12 +1519,17 @@ def do_subjects_preproc(subject_factory, session_ids=None, **preproc_params):
# load .ini ?
preproc_details = None
if isinstance(subject_factory, basestring):
with open(subject_factory, "r") as fd:
preproc_details = fd.read()
fd.close()
try:
with open(subject_factory, "r") as fd:
preproc_details = fd.read()
fd.close()
except IOError:
raise IOError('Could not load %s, please make sure to run your '
'script within the same folder'
' as the .ini file' % subject_factory)
subject_factory, _preproc_params = _generate_preproc_pipeline(
subject_factory, dataset_dir=preproc_params.get(
"dataset_dir", None))
subject_factory, dataset_dir=preproc_params.get(
"dataset_dir", None))
_preproc_params.update(preproc_params)
preproc_params = _preproc_params

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