Merge pull request #249 from nf-cmgg/update-vcf2db

update vcf2db
nf-cmgg · Dec 13, 2024 · 5cb9e2c · 5cb9e2c
2 parents 523c7a9 + 719004f
commit 5cb9e2c
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Showing 6 changed files with 22 additions and 20 deletions.
diff --git a/conf/modules.config b/conf/modules.config
@@ -335,7 +335,7 @@ process {
     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
     */
 
-    withName: "^.*VCF2DB\$" {
+    withName: "^.*:VCF2DB\$" {
         ext.prefix = { "${meta.id}.${meta.caller}" }
         ext.args    = "--a-ok gnomAD_AC --a-ok gnomAD_Hom"
     }

diff --git a/modules.json b/modules.json
@@ -219,7 +219,7 @@
                     },
                     "vcf2db": {
                         "branch": "master",
-                        "git_sha": "2a1ee188cf232cabbc63891462a06c6b5a5f114b",
+                        "git_sha": "439f05652b54826ff23f5baa505082d5d8587dd7",
                         "installed_by": ["modules"],
                         "patch": "modules/nf-core/vcf2db/vcf2db.diff"
                     },

diff --git a/modules/nf-core/vcf2db/environment.yml b/modules/nf-core/vcf2db/environment.yml
diff --git a/modules/nf-core/vcf2db/main.nf b/modules/nf-core/vcf2db/main.nf
diff --git a/modules/nf-core/vcf2db/tests/main.nf.test b/modules/nf-core/vcf2db/tests/main.nf.test
diff --git a/modules/nf-core/vcf2db/tests/main.nf.test.snap b/modules/nf-core/vcf2db/tests/main.nf.test.snap