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Update blacklists when new versions are available as discussed on #228
The previous versions of blacklists have been moved to
./assets/blacklists/v1.0
folder.The files in
assets/blacklists/v2.0
were obtained from the The ENCODE Blacklist Github repo.The file in
./assets/blacklists/v3.0
was downloaded from: https://sites.google.com/site/anshulkundaje/projects/blacklistsThe new structure of the
blacklist
folder is:. ├── v1.0 │ ├── GRCh37-blacklist.bed │ ├── GRCm38-blacklist.bed │ ├── hg19-blacklist.bed │ ├── hg38-blacklist.bed │ └── mm10-blacklist.bed ├── v2.0 │ ├── ce10-blacklist.v2.bed │ ├── dm6-blacklist.v2.bed │ ├── hg19-blacklist.v2.bed │ ├── hg38-blacklist.v2.bed │ └── mm10-blacklist.v2.bed └── v3.0 └── GRCh38_unified_blacklist.v3.bed
Closes #228
PR checklist
nextflow run . -profile test,docker
).nf-core lint .
).docs
is updatedCHANGELOG.md
is updatedREADME.md
is updated