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This repository has been archived by the owner on Mar 10, 2023. It is now read-only.

Issues: nf-core/kmermaid

14 Open 18 Closed
14 Open 18 Closed
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Issues list

Pipeline has 2 releases, but default branch is dev bug Something isn't working
#141 opened Apr 26, 2021 by maxulysse
TEMPLATE needs cleaning bug Something isn't working
#139 opened Mar 24, 2021 by ewels
Add hash2kmer.py code to get potential genes and sequences for each k-mer hash enhancement New feature or request
#134 opened Mar 16, 2021 by olgabot
KMERMAID: Convert all parameter docs to JSON schema enhancement New feature or request
#133 opened Mar 16, 2021 by apeltzer
1
@maxibor
1
Update to sourmash 4.0 enhancement New feature or request
#130 opened Mar 9, 2021 by olgabot
Add option to remove hashes, e.g. ribosomal seqs enhancement New feature or request
#127 opened Jan 11, 2021 by olgabot
2
Separate cell barcode counting and filtering enhancement New feature or request
#126 opened Jan 6, 2021 by olgabot
Add option to query newly created signatures with "sourmash search"
#118 opened Oct 29, 2020 by olgabot
add a new release for kmermaid
#109 opened Oct 20, 2020 by pranathivemuri
@olgabot
Add option to make per-cell bam files
#96 opened Aug 17, 2020 by olgabot
2
Add sourmash index option
#76 opened May 13, 2020 by olgabot
1
Update versions for r-base and bioconductor-edger to latest versions as in nf-core/rnaseq
#33 opened Dec 3, 2019 by olgabot
Add MultiQC with sourmash sig describe on signatures
#14 opened Oct 24, 2019 by olgabot
2
Add dashing/HyperLogLog as an option
#3 opened Aug 5, 2019 by olgabot
ProTip! What’s not been updated in a month: updated:<2024-10-12.