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Update meta.yml
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erikrikarddaniel committed Jan 30, 2025
1 parent ca904f2 commit 9b30e6a
Showing 1 changed file with 14 additions and 14 deletions.
28 changes: 14 additions & 14 deletions modules/nf-core/diamond/blastp/meta.yml
Original file line number Diff line number Diff line change
Expand Up @@ -54,77 +54,77 @@ input:
qseqid sseqid pident length mismatch gapopen qstart qend sstart send evalue bitscore
output:
- blast:
- meta:
- outmeta:
type: map
description: |
Groovy Map containing sample information
e.g. [ id:'test', single_end:false ]
e.g. [ id:'test', single_end:false, db:'ncbi-refseq' ]
pattern: "*.{blast,blast.gz}"
- "*.{blast,blast.gz}":
type: map
description: File containing blastp hits
pattern: "*.{blast,blast.gz}"
- xml:
- meta:
- outmeta:
type: map
description: |
Groovy Map containing sample information
e.g. [ id:'test', single_end:false ]
e.g. [ id:'test', single_end:false, db:'ncbi-refseq' ]
pattern: "*.{xml,xml.gz}"
- "*.{xml,xml.gz}":
type: map
description: File containing blastp hits
pattern: "*.{xml,xml.gz}"
- txt:
- meta:
- outmeta:
type: map
description: |
Groovy Map containing sample information
e.g. [ id:'test', single_end:false ]
e.g. [ id:'test', single_end:false, db:'ncbi-refseq' ]
pattern: "*.{txt,txt.gz}"
- "*.{txt,txt.gz}":
type: map
description: File containing hits in tabular BLAST format.
pattern: "*.{txt,txt.gz}"
- daa:
- meta:
- outmeta:
type: map
description: |
Groovy Map containing sample information
e.g. [ id:'test', single_end:false ]
e.g. [ id:'test', single_end:false, db:'ncbi-refseq' ]
pattern: "*.{daa,daa.gz}"
- "*.{daa,daa.gz}":
type: map
description: File containing hits DAA format
pattern: "*.{daa,daa.gz}"
- sam:
- meta:
- outmeta:
type: map
description: |
Groovy Map containing sample information
e.g. [ id:'test', single_end:false ]
e.g. [ id:'test', single_end:false, db:'ncbi-refseq' ]
pattern: "*.{sam,sam.gz}"
- "*.{sam,sam.gz}":
type: map
description: File containing aligned reads in SAM format
pattern: "*.{sam,sam.gz}"
- tsv:
- meta:
- outmeta:
type: map
description: |
Groovy Map containing sample information
e.g. [ id:'test', single_end:false ]
e.g. [ id:'test', single_end:false, db:'ncbi-refseq' ]
pattern: "*.{tsv,tsv.gz}"
- "*.{tsv,tsv.gz}":
type: map
description: Tab separated file containing taxonomic classification of hits
pattern: "*.{tsv,tsv.gz}"
- paf:
- meta:
- outmeta:
type: map
description: |
Groovy Map containing sample information
e.g. [ id:'test', single_end:false ]
e.g. [ id:'test', single_end:false, db:'ncbi-refseq' ]
pattern: "*.{paf,paf.gz}"
- "*.{paf,paf.gz}":
type: map
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