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Deeptmhmm #3981

Merged
merged 4 commits into from
Oct 13, 2023
Merged

Deeptmhmm #3981

merged 4 commits into from
Oct 13, 2023

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vagkaratzas
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PR checklist

Closes #XXX

  • This comment contains a description of changes (with reason).
  • If you've fixed a bug or added code that should be tested, add tests!
  • If you've added a new tool - have you followed the module conventions in the contribution docs
  • If necessary, include test data in your PR.
  • Remove all TODO statements.
  • Emit the versions.yml file.
  • Follow the naming conventions.
  • Follow the parameters requirements.
  • Follow the input/output options guidelines.
  • Add a resource label
  • Use BioConda and BioContainers if possible to fulfil software requirements.
  • Ensure that the test works with either Docker / Singularity. Conda CI tests can be quite flaky:
    • PROFILE=docker pytest --tag <MODULE> --symlink --keep-workflow-wd --git-aware
    • PROFILE=singularity pytest --tag <MODULE> --symlink --keep-workflow-wd --git-aware
    • PROFILE=conda pytest --tag <MODULE> --symlink --keep-workflow-wd --git-aware

@vagkaratzas vagkaratzas requested a review from SPPearce October 13, 2023 14:07
@vagkaratzas vagkaratzas added this pull request to the merge queue Oct 13, 2023
Merged via the queue into nf-core:master with commit 709fdc9 Oct 13, 2023
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@vagkaratzas vagkaratzas deleted the deeptmhmm branch October 13, 2023 15:03
lrauschning pushed a commit to lrauschning/modules that referenced this pull request Oct 16, 2023
@vagkaratzas
Deeptmhmm (nf-core#3981)
26e0215 
* deeptmhmm main.nf

* deeptmhmm meta.yml

* deeptmhmm tests main

* deeptmhmm tests validation
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@SPPearce SPPearce SPPearce approved these changes

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@vagkaratzas @SPPearce