Merge pull request #96 from nf-core/fix_release_lint

Fix minor linting issue for release
nf-core · Jan 31, 2025 · c919d5c · c919d5c
2 parents a2b88fb + bd8a54a
commit c919d5c
Show file tree

Hide file tree

Showing 3 changed files with 2 additions and 6 deletions.
diff --git a/.github/workflows/awsfulltest.yml b/.github/workflows/awsfulltest.yml
@@ -45,9 +45,6 @@ jobs:
 
       - name: Launch workflow via Seqera Platform
         uses: seqeralabs/action-tower-launch@v2
-        # TODO nf-core: You can customise AWS full pipeline tests as required
-        # Add full size test data (but still relatively small datasets for few samples)
-        # on the `test_full.config` test runs with only one set of parameters
         with:
           workspace_id: ${{ secrets.TOWER_WORKSPACE_ID }}
           access_token: ${{ secrets.TOWER_ACCESS_TOKEN }}

diff --git a/CHANGELOG.md b/CHANGELOG.md
@@ -20,6 +20,7 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0
 - [#92](https://github.com/nf-core/riboseq/pull/92) - Bump anota2seq for ordering fix ([@pinin4fjords](https://github.com/pinin4fjords), reviewed by [@FelixKrueger](https://github.com/FelixKrueger))
 - [#93](https://github.com/nf-core/riboseq/pull/93) - Bump anota2seq for dollar fix ([@pinin4fjords](https://github.com/pinin4fjords), reviewed by [@FelixKrueger](https://github.com/FelixKrueger))
 - [#94](https://github.com/nf-core/riboseq/pull/94) - Fix value channel for multi-contrast case ([@pinin4fjords](https://github.com/pinin4fjords), reviewed by [@FelixKrueger](https://github.com/FelixKrueger))
+- [#96](https://github.com/nf-core/riboseq/pull/96) - Fix minor linting issue for release ([@pinin4fjords](https://github.com/pinin4fjords), reviewed by [@FelixKrueger](https://github.com/FelixKrueger))
 
 ### `Fixed`
 

diff --git a/nextflow.config b/nextflow.config
@@ -243,8 +243,7 @@ profiles {
 includeConfig !System.getenv('NXF_OFFLINE') && params.custom_config_base ? "${params.custom_config_base}/nfcore_custom.config" : "/dev/null"
 
 // Load nf-core/riboseq custom profiles from different institutions.
-// TODO nf-core: Optionally, you can add a pipeline-specific nf-core config at https://github.com/nf-core/configs
-// includeConfig !System.getenv('NXF_OFFLINE') && params.custom_config_base ? "${params.custom_config_base}/pipeline/riboseq.config" : "/dev/null"
+includeConfig !System.getenv('NXF_OFFLINE') && params.custom_config_base ? "${params.custom_config_base}/pipeline/riboseq.config" : "/dev/null"
 
 // Set default registry for Apptainer, Docker, Podman, Charliecloud and Singularity independent of -profile
 // Will not be used unless Apptainer / Docker / Podman / Charliecloud / Singularity are enabled
@@ -303,7 +302,6 @@ manifest {
     name            = 'nf-core/riboseq'
     author          = """Jonathan Manning""" // The author field is deprecated from Nextflow version 24.10.0, use contributors instead
     contributors    = [
-        // TODO nf-core: Update the field with the details of the contributors to your pipeline. New with Nextflow version 24.10.0
         [
             name: 'Jonathan Manning',
             affiliation: 'Seqera',