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update fusionreport to 2.1.5p8 #435

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merged 2 commits into from
Nov 9, 2023
Merged

update fusionreport to 2.1.5p8 #435

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0a9eacf
update container for fusionreport
fevac Nov 9, 2023
7118cd0
update changelog
fevac Nov 9, 2023
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2 changes: 1 addition & 1 deletion CHANGELOG.md
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Expand Up @@ -19,7 +19,7 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0
- `--extreme_sensitivity` used for fusioninspector to minimize fusioninspector filtering [#424](https://github.com/nf-core/rnafusion/pull/424)
- `--extreme_sensitivity` removed in favor of `--max_sensitivity --max_mate_dist 10000000 --annotate --examine_coding_effect` to collect more data from fusioninspector [#426](https://github.com/nf-core/rnafusion/pull/426)
- `Arriba` updated to 2.4.0 [#429](https://github.com/nf-core/rnafusion/pull/429)
- Update `fusion-report` to 2.1.5p7 to fix download of references via proxy [#432](https://github.com/nf-core/rnafusion/pull/432) and rapidjson [#434](https://github.com/nf-core/rnafusion/pull/434)
- Update `fusion-report` to 2.1.5p8 to fix download of references via proxy [#432](https://github.com/nf-core/rnafusion/pull/432), rapidjson [#434](https://github.com/nf-core/rnafusion/pull/434) and logs [#435](https://github.com/nf-core/rnafusion/pull/435)

### Fixed

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2 changes: 1 addition & 1 deletion modules/local/fusionreport/detect/main.nf
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Expand Up @@ -3,7 +3,7 @@ process FUSIONREPORT {
label 'process_medium'

conda "bioconda::star=2.7.9a"
container "docker.io/clinicalgenomics/fusion-report:2.1.5p7"
container "docker.io/clinicalgenomics/fusion-report:2.1.5p8"


input:
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2 changes: 1 addition & 1 deletion modules/local/fusionreport/download/main.nf
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Expand Up @@ -3,7 +3,7 @@ process FUSIONREPORT_DOWNLOAD {
label 'process_medium'

conda "bioconda::star=2.7.9a"
container "docker.io/clinicalgenomics/fusion-report:2.1.5p7"
container "docker.io/clinicalgenomics/fusion-report:2.1.5p8"

input:
val(username)
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