Skip to content
nf-core CI

Slight fixes for rnaseq preprocessing #2936

Sign in to view logs

Slight fixes for rnaseq preprocessing

Slight fixes for rnaseq preprocessing #2936

Triggered via pull request September 16, 2024 11:30
@pinin4fjordspinin4fjords
synchronize #1382
rnaseq_propro_trimfail_fix
Status Cancelled
Total duration 5m 52s
Artifacts –

ci.yml

on: pull_request
Check for changes
19s
Check for changes
Matrix: test
confirm-pass
0s
confirm-pass
Fit to window
Zoom out
Zoom in

Annotations

40 errors and 4 warnings
tests/min_mapped_reads.nf.test docker NF-latest-everything
Canceling since a higher priority waiting request for 'nf-core CI-1382' exists
tests/min_mapped_reads.nf.test docker NF-latest-everything
The operation was canceled.
tests/hisat2.nf.test docker NF-latest-everything
Canceling since a higher priority waiting request for 'nf-core CI-1382' exists
tests/hisat2.nf.test docker NF-latest-everything
The operation was canceled.
tests/featurecounts_group_type.nf.test docker NF-23.04
Canceling since a higher priority waiting request for 'nf-core CI-1382' exists
tests/featurecounts_group_type.nf.test docker NF-23.04
The operation was canceled.
tests/default.nf.test docker NF-latest-everything
Canceling since a higher priority waiting request for 'nf-core CI-1382' exists
tests/default.nf.test docker NF-latest-everything
The operation was canceled.
tests/min_mapped_reads.nf.test docker NF-23.04
Canceling since a higher priority waiting request for 'nf-core CI-1382' exists
tests/min_mapped_reads.nf.test docker NF-23.04
The operation was canceled.
tests/remove_ribo_rna.nf.test docker NF-23.04
Canceling since a higher priority waiting request for 'nf-core CI-1382' exists
tests/remove_ribo_rna.nf.test docker NF-23.04
The operation was canceled.
tests/remove_ribo_rna.nf.test docker NF-latest-everything
Canceling since a higher priority waiting request for 'nf-core CI-1382' exists
tests/remove_ribo_rna.nf.test docker NF-latest-everything
The operation was canceled.
tests/salmon.nf.test docker NF-latest-everything
Canceling since a higher priority waiting request for 'nf-core CI-1382' exists
tests/salmon.nf.test docker NF-latest-everything
The operation was canceled.
tests/skip_trimming.nf.test docker NF-latest-everything
Canceling since a higher priority waiting request for 'nf-core CI-1382' exists
tests/skip_trimming.nf.test docker NF-latest-everything
The operation was canceled.
tests/featurecounts_group_type.nf.test docker NF-latest-everything
Canceling since a higher priority waiting request for 'nf-core CI-1382' exists
tests/featurecounts_group_type.nf.test docker NF-latest-everything
The operation was canceled.
tests/skip_qc.nf.test docker NF-23.04
Canceling since a higher priority waiting request for 'nf-core CI-1382' exists
tests/skip_qc.nf.test docker NF-23.04
The operation was canceled.
tests/kallisto.nf.test docker NF-latest-everything
Canceling since a higher priority waiting request for 'nf-core CI-1382' exists
tests/kallisto.nf.test docker NF-latest-everything
The operation was canceled.
tests/skip_trimming.nf.test docker NF-23.04
Canceling since a higher priority waiting request for 'nf-core CI-1382' exists
tests/skip_trimming.nf.test docker NF-23.04
The operation was canceled.
tests/hisat2.nf.test docker NF-23.04
Canceling since a higher priority waiting request for 'nf-core CI-1382' exists
tests/hisat2.nf.test docker NF-23.04
The operation was canceled.
tests/kallisto.nf.test docker NF-23.04
Canceling since a higher priority waiting request for 'nf-core CI-1382' exists
tests/kallisto.nf.test docker NF-23.04
The operation was canceled.
tests/star_rsem.nf.test docker NF-23.04
Canceling since a higher priority waiting request for 'nf-core CI-1382' exists
tests/star_rsem.nf.test docker NF-23.04
The operation was canceled.
tests/star_rsem.nf.test docker NF-latest-everything
Canceling since a higher priority waiting request for 'nf-core CI-1382' exists
tests/default.nf.test docker NF-23.04
Canceling since a higher priority waiting request for 'nf-core CI-1382' exists
tests/star_rsem.nf.test docker NF-latest-everything
The operation was canceled.
tests/default.nf.test docker NF-23.04
The operation was canceled.
tests/skip_qc.nf.test docker NF-latest-everything
Canceling since a higher priority waiting request for 'nf-core CI-1382' exists
tests/skip_qc.nf.test docker NF-latest-everything
The operation was canceled.
tests/salmon.nf.test docker NF-23.04
Canceling since a higher priority waiting request for 'nf-core CI-1382' exists
tests/salmon.nf.test docker NF-23.04
The operation was canceled.
subworkflows/nf-core/fastq_qc_trim_filter_setstrandedness/tests/main.function.nf.test docker NF-latest-everything
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
subworkflows/nf-core/fastq_qc_trim_filter_setstrandedness/tests/main.function.nf.test docker NF-23.04
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
subworkflows/nf-core/fastq_qc_trim_filter_setstrandedness/tests/main.nf.test docker NF-latest-everything
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
subworkflows/nf-core/fastq_qc_trim_filter_setstrandedness/tests/main.nf.test docker NF-23.04
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/