Update controlfreec version

nf-core · Sep 18, 2023 · 6242c31 · 6242c31
1 parent c6ec5dc
commit 6242c31
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Showing 9 changed files with 52 additions and 24 deletions.
diff --git a/CHANGELOG.md b/CHANGELOG.md
@@ -17,11 +17,13 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0
 
 - [#1232](https://github.com/nf-core/sarek/pull/1232) - Fix Zenodo IDs in manifest
 - [#1236](https://github.com/nf-core/sarek/pull/1236) - Fix annotation cache folder verification when no annotation
+- [#1241](https://github.com/nf-core/sarek/pull/1241) - Fix axis text of controlfreec plots closing [#921](https://github.com/nf-core/sarek/issues/921)
 
 ### Dependencies
 
-| Dependency | Old version | New version |
-| ---------- | ----------- | ----------- |
+| Dependency    | Old version | New version |
+| ------------- | ----------- | ----------- |
+| Control-FREEC | 11.6        | 11.6b       |
 
 ## [3.3.0](https://github.com/nf-core/sarek/releases/tag/3.3.0) - Rapaselet
 

diff --git a/modules.json b/modules.json
@@ -77,28 +77,29 @@
                     },
                     "controlfreec/assesssignificance": {
                         "branch": "master",
-                        "git_sha": "911696ea0b62df80e900ef244d7867d177971f73",
+                        "git_sha": "053564d29a20d45323547973c4023914923823df",
                         "installed_by": ["modules"]
                     },
                     "controlfreec/freec": {
                         "branch": "master",
-                        "git_sha": "911696ea0b62df80e900ef244d7867d177971f73",
+                        "git_sha": "053564d29a20d45323547973c4023914923823df",
                         "installed_by": ["modules"]
                     },
                     "controlfreec/freec2bed": {
                         "branch": "master",
-                        "git_sha": "911696ea0b62df80e900ef244d7867d177971f73",
+                        "git_sha": "053564d29a20d45323547973c4023914923823df",
                         "installed_by": ["modules"]
                     },
                     "controlfreec/freec2circos": {
                         "branch": "master",
-                        "git_sha": "911696ea0b62df80e900ef244d7867d177971f73",
+                        "git_sha": "053564d29a20d45323547973c4023914923823df",
                         "installed_by": ["modules"]
                     },
                     "controlfreec/makegraph": {
                         "branch": "master",
-                        "git_sha": "911696ea0b62df80e900ef244d7867d177971f73",
-                        "installed_by": ["modules"]
+                        "git_sha": "053564d29a20d45323547973c4023914923823df",
+                        "installed_by": ["modules"],
+                        "patch": "modules/nf-core/controlfreec/makegraph/controlfreec-makegraph.diff"
                     },
                     "custom/dumpsoftwareversions": {
                         "branch": "master",

diff --git a/modules/nf-core/controlfreec/assesssignificance/main.nf b/modules/nf-core/controlfreec/assesssignificance/main.nf
diff --git a/modules/nf-core/controlfreec/freec/main.nf b/modules/nf-core/controlfreec/freec/main.nf
diff --git a/modules/nf-core/controlfreec/freec2bed/main.nf b/modules/nf-core/controlfreec/freec2bed/main.nf
diff --git a/modules/nf-core/controlfreec/freec2circos/main.nf b/modules/nf-core/controlfreec/freec2circos/main.nf
diff --git a/modules/nf-core/controlfreec/makegraph/controlfreec-makegraph.diff b/modules/nf-core/controlfreec/makegraph/controlfreec-makegraph.diff
diff --git a/modules/nf-core/controlfreec/makegraph/main.nf b/modules/nf-core/controlfreec/makegraph/main.nf
diff --git a/modules/nf-core/controlfreec/makegraph/meta.yml b/modules/nf-core/controlfreec/makegraph/meta.yml