Code

Update modules once again#459

Code

Merged

maxulysse merged 22 commits intonf-core:devnf-core/sarek:devfrom maxulysse:dev_get_versionsmaxulysse/nf-core_sarek:dev_get_versionsCopy head branch name to clipboardDec 2, 2021

+1,294-5,713

Commits

Commits on Nov 26, 2021

• feat: nf-core modules update -a

  maxulysse

  committed
  a626319

• fix: update NF version for CI

  maxulysse

  committed
  b858165

Commits on Nov 29, 2021

• chores: Update Nextflow version

  maxulysse

  committed
  d505d4e

• fix: nf-core linting

  maxulysse

  committed
  5c6c771

• fix: update to proper syntax

  maxulysse

  committed
  e7ab373

• fix: this is the actual proper syntax

  maxulysse

  committed
  6346782

• fix: remove inbricated env variables

  maxulysse

  committed
  70e24af

• fix: this time it's really the current good syntax

  maxulysse

  committed
  afc485e

Commits on Nov 30, 2021

• chores: first updates on local modules

  maxulysse

  committed
  a459d84

• I'm proud of that commit @FriederikeHanssen

  maxulysse

  committed
  d3b0ea8

• fix: update all untill RECALIBRATE

  maxulysse

  committed
  abaf86f

• fix: all but MultiQC

  maxulysse

  committed
  fff7498

• fix: MultiQC name collision

  maxulysse

  committed
  7ca6095

Commits on Dec 1, 2021

• fix: simplify syntax and logic for annotation

  maxulysse

  committed
  372e938

• fix: bwamem2-mem tests

  maxulysse

  committed
  986cd11

• fix: default tests

  maxulysse

  committed
  f331671

• fix: annotation tests

  maxulysse

  committed
  93ad287

• fix: lint?

  maxulysse

  committed
  ab9eb4b

• fix: improve syntax

  maxulysse

  committed
  4b43670

• fix: this time annotation tests are fully fixed

  maxulysse

  committed
  5ff4cc5

• fix: skip_markduplicates tests

  maxulysse

  committed
  9580f69

• feat: greatly simplify mapping subworkflow

  maxulysse

  committed
  18209c0