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Add somatic Variant Callers #5

Merged

apeltzer merged 6 commits into nf-core:dev from maxulysse:nf-core-VC

May 3, 2019

Member

maxulysse commented May 3, 2019

Add Manta
Add Strelka
Add StrelkaBP
Add MuTecT2
Add Freebayes
Add Ascat
Add Controlfreec

PR checklist

This comment contains a description of changes (with reason)
If you've fixed a bug or added code that should be tested, add tests!
Ensure the test suite passes (nextflow run . -profile test,docker)

maxulysse added 6 commits

May 3, 2019 13:53


          fix Jenkins tests

cf29773


          sort ansi codes

578e239


          add tests

ed447ba


          add Manta, Strelka, StrelkaBP, MuTecT2, Freebayes, Ascat, Controlfreec

d93b562


          update docs

45928fc


          fix travis tests

a1a9014

apeltzer merged commit 0e78ffb into nf-core:dev

maxulysse pushed a commit that referenced this pull request


          Merge pull request #5 from nf-core/dev

53cef95

update nf-core

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