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add test full config to aws s3 #617

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Jul 5, 2022
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2 changes: 1 addition & 1 deletion CHANGELOG.md
Original file line number Diff line number Diff line change
Expand Up @@ -33,7 +33,7 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0
- [#594](https://github.com/nf-core/sarek/pull/594) - Add parameter `--save_output_as_bam` to allow output of result files in BAM format
- [#597](https://github.com/nf-core/sarek/pull/597) - Added tiddit for tumor variant calling
- [#600](https://github.com/nf-core/sarek/pull/600) - Added description for UMI related params in schema
- [#604](https://github.com/nf-core/sarek/pull/604) - Added full size tests WGS 30x NA12878
- [#604](https://github.com/nf-core/sarek/pull/604), [#617](https://github.com/nf-core/sarek/pull/617) - Added full size tests WGS 30x NA12878

### Changed

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2 changes: 1 addition & 1 deletion conf/test_full.config
Original file line number Diff line number Diff line change
Expand Up @@ -15,7 +15,7 @@ params {
config_profile_description = 'Full test dataset to check pipeline function'

// Input data for full size test
input = '${projectDir}/tests/csv/3.0/test_full_data.csv'
input = 'https://raw.githubusercontent.com/nf-core/test-datasets/sarek/testdata/csv/NA12878_WGS_30x_full_test.csv'

// Other params
tools = 'strelka,freebayes,haplotypecaller,deepvariant,manta,tiddit,cnvkit,vep'
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2 changes: 0 additions & 2 deletions tests/csv/3.0/test_full_data.csv

This file was deleted.