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ControlFreec intervals #728

Merged
merged 5 commits into from
Sep 5, 2022
Merged

ControlFreec intervals #728

merged 5 commits into from
Sep 5, 2022

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FriederikeHanssen
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bandaids #670

PR checklist

  • This comment contains a description of changes (with reason).
  • If you've fixed a bug or added code that should be tested, add tests!
    • If you've added a new tool - have you followed the pipeline conventions in the contribution docs
    • If necessary, also make a PR on the nf-core/sarek branch on the nf-core/test-datasets repository.
  • Make sure your code lints (nf-core lint).
  • Ensure the test suite passes (nextflow run . -profile test,docker --outdir <OUTDIR>).
  • Usage Documentation in docs/usage.md is updated.
  • Output Documentation in docs/output.md is updated.
  • CHANGELOG.md is updated.
  • README.md is updated (including new tool citations and authors/contributors).

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github-actions bot commented Sep 3, 2022 •
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nf-core lint overall result: Passed ✅ ⚠️

Posted for pipeline commit d2ec6b0

+| ✅ 151 tests passed       |+
#| ❔   4 tests were ignored |#
!| ❗   1 tests had warnings |!

❗ Test warnings:

❔ Tests ignored:

  • files_unchanged - File ignored due to lint config: assets/nf-core-sarek_logo_light.png
  • files_unchanged - File ignored due to lint config: docs/images/nf-core-sarek_logo_light.png
  • files_unchanged - File ignored due to lint config: docs/images/nf-core-sarek_logo_dark.png
  • files_unchanged - File ignored due to lint config: lib/NfcoreTemplate.groovy

✅ Tests passed:

Run details

  • nf-core/tools version 2.5.1
  • Run at 2022-09-04 08:06:18

@FriederikeHanssen
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@nf-core-bot please fix linting

@FriederikeHanssen
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@nf-core-bot fix linting

@FriederikeHanssen FriederikeHanssen marked this pull request as ready for review September 4, 2022 08:01
@maxulysse maxulysse merged commit 5e4cff5 into nf-core:dev Sep 5, 2022
@FriederikeHanssen FriederikeHanssen mentioned this pull request Sep 7, 2022
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@maxulysse maxulysse maxulysse approved these changes

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@FriederikeHanssen @maxulysse @nf-core-bot