Code

Add ci nftests#381

Code

Merged

nschcolnicov merged 20 commits intonf-core:devnf-core/smrnaseq:devfrom nschcolnicov:add_ci_nftestsnschcolnicov/smrnaseq:add_ci_nftestsCopy head branch name to clipboardAug 26, 2024

+4,017-18

Commits

Commits on Aug 19, 2024

• Initialized tests

  

  zxBIB Schcolnicov

  committed
  82bea4d

• Pulled from dev

  

  zxBIB Schcolnicov

  committed
  409b1fc

• Added techincalrepeats nftest and updated nf-test config

  

  zxBIB Schcolnicov

  committed
  a574696

• Updated tests and added snaps

  

  zxBIB Schcolnicov

  committed
  70a62c6

Commits on Aug 20, 2024

• Pulled from dev

  nschcolnicov

  committed
  acd4ce6

• Minimal profiles for testing ci settings

  nschcolnicov

  committed
  f64efd0

Commits on Aug 21, 2024

• Merge branch 'dev' of https://github.com/nf-core/smrnaseq into add_ci_nftests

  

  zxBIB Schcolnicov

  committed
  de50116

• Standardized changelog and generated nf-tests

  

  zxBIB Schcolnicov

  committed
  38521e9

Commits on Aug 22, 2024

• Updated tests and snaps

  

  zxBIB Schcolnicov

  committed
  fd3405d

• Updated test_index test

  

  zxBIB Schcolnicov

  committed
  b598f73

• Updated tests to split snapshot by subdirectories

  

  zxBIB Schcolnicov

  committed
  0f8ab7f

• Updated snaps

  

  zxBIB Schcolnicov

  committed
  e307076

Commits on Aug 23, 2024

• Updated test_index to work in CI

  

  zxBIB Schcolnicov

  committed
  5638e24

• Merge branch 'dev' of https://github.com/nf-core/smrnaseq into add_ci_nftests

  

  zxBIB Schcolnicov

  committed
  eae5055

• Adapted params to work with ingested datasets

  

  zxBIB Schcolnicov

  committed
  003eb34

• Fixed pre-commit

  

  zxBIB Schcolnicov

  committed
  91d18a0

Commits on Aug 24, 2024

• Using nf-test version 0.9.0 in ci

  nschcolnicov

  committed
  46ed8de

Commits on Aug 26, 2024

• Pulled from dev

  

  zxBIB Schcolnicov

  committed
  4a73a71

• Added skipfastp nftest

  

  zxBIB Schcolnicov

  committed
  92c289d

• Updated snaps

  nschcolnicov

  committed
  e843703