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Add implicit workflow declaration to dsl2 template #1056

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JoseEspinosa opened this issue May 5, 2021 · 0 comments
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Add implicit workflow declaration to dsl2 template #1056

JoseEspinosa opened this issue May 5, 2021 · 0 comments

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@JoseEspinosa
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JoseEspinosa commented May 5, 2021

As discussed on this issue and merged on this PR of the rnaseq pipeline, DSL2 will include the implicit declaration of the workflow. This should enable that a nf-core pipeline can be imported as subworkflow other non-nf-core workflows as pointed out by @ewels in the module slack channel: "eg. run RNAseq analysis and then run whatever custom different expression analysis. or run rnaseq + atacseq and do x + y afterwards, etc etc".

Hence, the implicit declaration of the workflow needs to be added to the DSL2 template.

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