Code

Hybrid tree building#8

Code

Merged

andrewjpage merged 16 commits intonickjcroucher:masternickjcroucher/gubbins:masterfrom andrewjpage:hybrid_tree_buildingandrewjpage/gubbins:hybrid_tree_buildingCopy head branch name to clipboardApr 23, 2012

+125-28

Commits

Commits on Apr 20, 2012

• hybrid tree building python script

  andrewjpage

  committed
  e2a06c9

Commits on Apr 23, 2012

• verbose output

  andrewjpage

  committed
  76c0c5c

• fix hybrid command

  andrewjpage

  committed
  a9195e9

• return required at end of methods

  andrewjpage

  committed
  3d93f7a

• use the original input file for fasttree

  andrewjpage

  committed
  6f5ee53

• provide previous tree to fasttree

  andrewjpage

  committed
  50f5bfa

• FastTree without abs path

  andrewjpage

  committed
  12abe31

• pass globals as params

  andrewjpage

  committed
  d34fe5c

• run rf distance for 2nd or more iteration

  andrewjpage

  committed
  9edcec5

• rf distance verbose

  andrewjpage

  committed
  4b2a333

• import math

  andrewjpage

  committed
  d1c4645

• convert RF distance to string before printing

  andrewjpage

  committed
  e585d1a

• dont round up RF distance

  andrewjpage

  committed
  ea8a8e6

• save all previous RF distances

  andrewjpage

  committed
  b7f27bb

• hybrid should run fasttree first

  andrewjpage

  committed
  436b515

• make python script executable

  andrewjpage

  committed
  f761d95