MNT: Run pre-commit

.github/ISSUE_TEMPLATE/documentation.md

@@ -11,4 +11,4 @@ For the Documentation request, please include the following:
 ------------------------
 What would you like changed/added and why?
 Do you have any suggestions for the new documents?
--->
+-->

.github/workflows/contrib.yml

@@ -47,7 +47,7 @@ jobs:
         run: |
           python -m black --diff --color --check wrapper
           python -m isort --diff --color --check wrapper
-  
+
   codespell:
     name: Check for spelling errors
     runs-on: ubuntu-latest

.maint/ci/install_dependencies.sh

@@ -13,7 +13,7 @@ if [ "$OS_TYPE" = "ubuntu-latest" ]; then
 elif  [ "$OS_TYPE" = "macos-latest" ]; then
     brew install graphviz
 else
-    echo "Unknown OS_TYPE: $OS_TYPE"	
+    echo "Unknown OS_TYPE: $OS_TYPE"
 fi
 
 set +eux

.maint/former.json

@@ -2,4 +2,4 @@
   {
     "name": "Berleant, Shoshana"
   }
-]
+]

.maint/update_changes.sh

@@ -52,4 +52,3 @@ fi
 
 # Replace old CHANGES.rst with new file
 mv newchanges CHANGES.rst
-

.vscode/settings.json

@@ -8,4 +8,4 @@
     "python.linting.enabled": true,
     "python.testing.pytestArgs": [],
     "python.linting.pylintEnabled": false
-}
+}

CONTRIBUTING.md

@@ -1,3 +1,3 @@
 # Contributing to *fMRIPrep*
 
-*fMRIPrep* is a project of the [*NiPreps* Community, which specifies the contributing guidelines](https://www.nipreps.org/community/).
+*fMRIPrep* is a project of the [*NiPreps* Community, which specifies the contributing guidelines](https://www.nipreps.org/community/).

Dockerfile_devel

@@ -76,7 +76,7 @@ RUN mkdir /src/codeserver &&\
 
 RUN /src/codeserver/code-server --install-extension eamodio.gitlens &&\
     /src/codeserver/code-server --install-extension ms-python.python
-    
+
 
 ENTRYPOINT ["/src/codeserver/code-server", "--auth", "none", "/src/fmriprep"]
 

LICENSE

@@ -199,4 +199,3 @@
    WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
    See the License for the specific language governing permissions and
    limitations under the License.
-

docs/_static/SampleReport/sample_report.html

@@ -324,7 +324,7 @@ <h3 id="references" class="unnumbered">References</h3>
 nonlinear registration with `antsRegistration` (ANTs 2.3.3),
 using brain-extracted versions of both T1w reference and the T1w template.
 The following template was selected for spatial normalization:
-*ICBM 152 Nonlinear Asymmetrical template version 2009c* [@mni152nlin2009casym, RRID:SCR_008796; TemplateFlow ID: MNI152NLin2009cAsym], 
+*ICBM 152 Nonlinear Asymmetrical template version 2009c* [@mni152nlin2009casym, RRID:SCR_008796; TemplateFlow ID: MNI152NLin2009cAsym],
 
 Functional data preprocessing
 
@@ -899,4 +899,4 @@ <h1 class="sub-report-title">Errors</h1>
     }
 </script>
 </body>
-</html>
+</html>

docs/_static/theme_overrides.css

@@ -18,4 +18,4 @@
    margin: 0 0 0 5px;
    padding: 3px;
    background: rgba(0, 0, 0, .1);
-}
+}

docs/pull_request_template.md

@@ -8,7 +8,7 @@ beginning "Welcome, new contributors!".
 
 <!--
 Please describe here the main features / changes proposed for review and integration in fMRIPrep
-If this PR addresses some existing problem, please use GitHub's citing tools 
+If this PR addresses some existing problem, please use GitHub's citing tools
 (eg. ref #, closes # or fixes #).
 If there is not an existing issue open describing the problem, please consider opening a new
 issue first and then link it from here (so the *fMRIPrep* community has a better understanding

docs/requirements.txt

@@ -1 +0,0 @@
-