Merge pull request #2754 from mgxd/fix/collect_data

FIX: Preserve `collect_data` behavior by using named args
nipreps · Apr 6, 2022 · 6ba171f · 6ba171f
2 parents 2d335ed + 940cba3
commit 6ba171f
Showing 1 changed file with 2 additions and 2 deletions.
diff --git a/fmriprep/workflows/base.py b/fmriprep/workflows/base.py
@@ -153,8 +153,8 @@ def init_single_subject_wf(subject_id):
     subject_data = collect_data(
         config.execution.layout,
         subject_id,
-        config.execution.task_id,
-        config.execution.echo_idx,
+        task=config.execution.task_id,
+        echo=config.execution.echo_idx,
         bids_filters=config.execution.bids_filters)[0]
 
     if 'flair' in config.workflow.ignore: