FIX: Update FS->MCRIBS label mappings

nipreps · Jul 11, 2024 · f086706 · f086706
1 parent 15327e1
commit f086706
Showing 1 changed file with 10 additions and 2 deletions.
diff --git a/nibabies/workflows/anatomical/surfaces.py b/nibabies/workflows/anatomical/surfaces.py
@@ -71,25 +71,29 @@ def init_mcribs_surface_recon_wf(
         'workflow, using the reference T2w and a pre-computed anatomical segmentation'
     )
 
-    # mapping of labels from FS to M-CRIB-S
+    # mapping of labels from FS to M-CRIB-S (DrawEM)
     fs2mcribs = {
+        1: 21,
         2: 51,
         3: 21,
         4: 49,
         5: 0,
+        6: 17,
         7: 17,
         8: 17,
         10: 43,
         11: 41,
         12: 47,
         13: 47,
-        14: 0,
+        14: 114,
         15: 0,
         16: 19,
         17: 1,
         18: 3,
+        24: 83,
         26: 41,
         28: 45,
+        30: 51,
         31: 49,
         41: 52,
         42: 20,
@@ -105,7 +109,11 @@ def init_mcribs_surface_recon_wf(
         54: 4,
         58: 40,
         60: 44,
+        62: 25,
         63: 50,
+        77: 51,
+        85: 21,
+        172: 172,
         253: 48,
     }
     fs_to_mcribs = pe.Node(MapLabels(mappings=fs2mcribs), name='fs_to_mcribs')