Merge pull request #228 from pbashyal-nmdp/missing_requirements

Missing requirements.txt in distribution
nmdp-bioinformatics · Apr 17, 2023 · 16ca552 · 16ca552
2 parents 7ae9c78 + aa0b250
commit 16ca552
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Showing 7 changed files with 10 additions and 6 deletions.
diff --git a/Dockerfile b/Dockerfile
@@ -4,7 +4,7 @@ LABEL MAINTAINER="Pradeep Bashyal"
 
 WORKDIR /app
 
-ARG PY_ARD_VERSION=1.0.0rc6
+ARG PY_ARD_VERSION=1.0.0rc7
 
 COPY requirements.txt /app
 RUN pip install --no-cache-dir --upgrade pip && \

diff --git a/MANIFEST.in b/MANIFEST.in
@@ -3,8 +3,10 @@ include AUTHORS.rst
 include CONTRIBUTING.rst
 include HISTORY.rst
 include LICENSE
-include README.rst
+include README.md
 include pyard/*.csv
+include requirements.txt
+include requirements-tests.txt
 
 recursive-exclude tests *
 recursive-exclude * __pycache__

diff --git a/README.md b/README.md
@@ -38,6 +38,8 @@ Human leukocyte antigen (HLA) genes encode cell surface proteins that are import
 ```shell
 pip install py-ard
 ```
+Note: With `py-ard` version *1.0.0* and higher, the redux API has changed. If your use requires the older API, please install with `pip install py-ard==0.9.2`
+
 
 ### Install With Homebrew
 

diff --git a/api-spec.yaml b/api-spec.yaml
@@ -2,7 +2,7 @@ openapi: 3.0.3
 info:
   title: ARD Reduction
   description: Reduce to ARD Level
-  version: "1.0.0rc6"
+  version: "1.0.0rc7"
 servers:
   - url: 'http://localhost:8080'
 tags:

diff --git a/pyard/__init__.py b/pyard/__init__.py
@@ -27,7 +27,7 @@
 from .misc import get_imgt_db_versions as db_versions
 
 __author__ = """NMDP Bioinformatics"""
-__version__ = "1.0.0rc6"
+__version__ = "1.0.0rc7"
 
 
 def init(

diff --git a/setup.cfg b/setup.cfg
@@ -1,5 +1,5 @@
 [bumpversion]
-current_version = 1.0.0rc6
+current_version = 1.0.0rc7
 commit = True
 tag = True
 

diff --git a/setup.py b/setup.py
@@ -36,7 +36,7 @@
 
 setup(
     name="py-ard",
-    version="1.0.0rc6",
+    version="1.0.0rc7",
     description="ARD reduction for HLA with Python",
     long_description=readme,
     long_description_content_type="text/markdown",