add navbar section titles

ocbe-uio · Mar 13, 2024 · 5201737 · 5201737
1 parent 4457da5
commit 5201737
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Showing 3 changed files with 81 additions and 22 deletions.
diff --git a/_quarto.yml b/_quarto.yml
@@ -19,7 +19,24 @@ website:
   navbar:
     background: light
     search: true
-    tools:
+
+    left: 
+      - href: survomics.html#introduction
+        text: "Introduction"
+      - href: survomics.html#tcga-survival-and-clinical-data
+        text: "Clinical data"
+      - href: survomics.html#tcga-omics-data
+        text: "Omics data"
+      - href: survomics.html#survival-analysis-with-low-dimensional-input-data
+        text: "Low dimension"
+      - href: survomics.html#survival-analysis-with-high-dimensional-input-data
+        text: "High dimension"
+      - href: survomics.html#survival-model-validation
+        text: "Model validation"
+      - href: survomics.html#multi-omics-integrative-modeling
+        text: "Multi-omics"
+
+    right: 
       - icon: github
         menu:
           - text: Source Code

diff --git a/docs/survomics.html b/docs/survomics.html
@@ -6,7 +6,7 @@
 
 <meta name="viewport" content="width=device-width, initial-scale=1.0, user-scalable=yes">
 
-<meta name="dcterms.date" content="2024-03-11">
+<meta name="dcterms.date" content="2024-03-13">
 
 <title>Survive with Omics - Supplemental information for ‘Tutorial on survival modeling with applications to omics data’</title>
 <style>
@@ -130,24 +130,63 @@
     <span class="navbar-title">Survive with Omics</span>
     </a>
   </div>
-        <div class="quarto-navbar-tools ms-auto">
-    <div class="dropdown">
-      <a href="" title="" id="quarto-navigation-tool-dropdown-0" class="quarto-navigation-tool dropdown-toggle px-1" data-bs-toggle="dropdown" aria-expanded="false" aria-label=""><i class="bi bi-github"></i></a>
-      <ul class="dropdown-menu dropdown-menu-end" aria-labelledby="quarto-navigation-tool-dropdown-0">
-          <li>
-            <a class="dropdown-item quarto-navbar-tools ms-auto-item" href="https://github.com/ocbe-uio/survomics">
-            Source Code
-            </a>
-          </li>
-          <li>
-            <a class="dropdown-item quarto-navbar-tools ms-auto-item" href="https://github.com/ocbe-uio/survomics/issues/new">
-            Report a Bug
-            </a>
-          </li>
-      </ul>
-    </div>
+            <div id="quarto-search" class="" title="Search"></div>
+          <button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbarCollapse" aria-controls="navbarCollapse" aria-expanded="false" aria-label="Toggle navigation" onclick="if (window.quartoToggleHeadroom) { window.quartoToggleHeadroom(); }">
+  <span class="navbar-toggler-icon"></span>
+</button>
+          <div class="collapse navbar-collapse" id="navbarCollapse">
+            <ul class="navbar-nav navbar-nav-scroll me-auto">
+  <li class="nav-item">
+    <a class="nav-link" href="./survomics.html#introduction" rel="" target="">
+ <span class="menu-text">Introduction</span></a>
+  </li>  
+  <li class="nav-item">
+    <a class="nav-link" href="./survomics.html#tcga-survival-and-clinical-data" rel="" target="">
+ <span class="menu-text">Clinical data</span></a>
+  </li>  
+  <li class="nav-item">
+    <a class="nav-link" href="./survomics.html#tcga-omics-data" rel="" target="">
+ <span class="menu-text">Omics data</span></a>
+  </li>  
+  <li class="nav-item">
+    <a class="nav-link" href="./survomics.html#survival-analysis-with-low-dimensional-input-data" rel="" target="">
+ <span class="menu-text">Low dimension</span></a>
+  </li>  
+  <li class="nav-item">
+    <a class="nav-link" href="./survomics.html#survival-analysis-with-high-dimensional-input-data" rel="" target="">
+ <span class="menu-text">High dimension</span></a>
+  </li>  
+  <li class="nav-item">
+    <a class="nav-link" href="./survomics.html#survival-model-validation" rel="" target="">
+ <span class="menu-text">Model validation</span></a>
+  </li>  
+  <li class="nav-item">
+    <a class="nav-link" href="./survomics.html#multi-omics-integrative-modeling" rel="" target="">
+ <span class="menu-text">Multi-omics</span></a>
+  </li>  
+</ul>
+            <ul class="navbar-nav navbar-nav-scroll ms-auto">
+  <li class="nav-item dropdown ">
+    <a class="nav-link dropdown-toggle" href="#" id="nav-menu-bi-github" role="button" data-bs-toggle="dropdown" aria-expanded="false" rel="" target="">
+      <i class="bi bi-github" role="img">
+</i> 
+ <span class="menu-text"></span>
+    </a>
+    <ul class="dropdown-menu dropdown-menu-end" aria-labelledby="nav-menu-bi-github">    
+        <li>
+    <a class="dropdown-item" href="https://github.com/ocbe-uio/survomics" rel="" target="">
+ <span class="dropdown-text">Source Code</span></a>
+  </li>  
+        <li>
+    <a class="dropdown-item" href="https://github.com/ocbe-uio/survomics/issues/new" rel="" target="">
+ <span class="dropdown-text">Report a Bug</span></a>
+  </li>  
+    </ul>
+  </li>
+</ul>
+            <div class="quarto-navbar-tools">
 </div>
-          <div id="quarto-search" class="" title="Search"></div>
+          </div> <!-- /navcollapse -->
       </div> <!-- /container-fluid -->
     </nav>
 </header>
@@ -223,9 +262,9 @@ <h1 class="title">Supplemental information for ‘Tutorial on survival modeling
 
 
     <div>
-    <div class="quarto-title-meta-heading">Published</div>
+    <div class="quarto-title-meta-heading">UPDATED</div>
     <div class="quarto-title-meta-contents">
-      <p class="date">March 11, 2024</p>
+      <p class="date">March 13, 2024</p>
     </div>
   </div>
 

diff --git a/survomics.qmd b/survomics.qmd
@@ -1,6 +1,9 @@
 ---
 title: "Supplemental information for 'Tutorial on survival modeling with applications to omics data'"
-date: "last-modified"
+date: last-modified
+lang: en
+language: 
+  title-block-published: "UPDATED"
 toc: true
 toc-title: "**Table of Contents**"
 toc-depth: 4