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Bug(?): IJ exported OME-TIFFs lack original metadata #4201

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joshmoore opened this issue Jun 20, 2024 · 0 comments · May be fixed by #4219
Open

Bug(?): IJ exported OME-TIFFs lack original metadata #4201

joshmoore opened this issue Jun 20, 2024 · 0 comments · May be fixed by #4219

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@joshmoore
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Tischi recently asked about what he considered "missing/loss metadata". After some testing, we found the following:

File Created with OME-XML Metadata Pane
xy.oir N/A rich rich
xy.ij.tiff IJ save poor rich
xy-1.ome.tiff B-F exporter rich poor 👈🏽
xy-2.ome.tiff bfconvert rich rich
xy-3.ome.tiff ngff-converter rich rich

When reading and then writing with B-F importer/exporter, the original metadata annotation does not get included in the OME-XML of the xy-1.ome.tiff.

cc: @tischi
melissalinkert added a commit to melissalinkert/bioformats that referenced this issue Aug 6, 2024
@melissalinkert
ImageJ exporter: save original metadata
9e9e2ed 
Fixes ome#4201.
@melissalinkert melissalinkert linked a pull request Aug 6, 2024 that will close this issue
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ImageJ exporter: save original metadata melissalinkert/bioformats
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@joshmoore