Skip to content

Issues: oncodash/ontoweaver

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

12 Open 24 Closed
12 Open 24 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Issues list

Add "id" for edges feature New feature
#81 opened Dec 18, 2024 by njmmatthieu
logging info bug Something isn't working
#80 opened Dec 17, 2024 by njmmatthieu
pb from_subject
#78 opened Dec 17, 2024 by njmmatthieu
@mbaric758
2
About NaN and NoneType bug Something isn't working
#73 opened Dec 16, 2024 by njmmatthieu OntoWeaver 1.0
@mbaric758
1
Make message collecting differentiate between errors and warnings enhancement Improvement over an existing feature
#68 opened Dec 11, 2024 by jdreo OntoWeaver 1.0
cleaner naming scheme for high-level functions enhancement Improvement over an existing feature
#67 opened Dec 11, 2024 by jdreo
3 tasks
OntoWeaver 1.0
Refactor testing and readme to consistently use new extraction and reconciliation functions instead of extract_all. refactoring
#63 opened Dec 2, 2024 by mbaric758 OntoWeaver 1.0
@mbaric758
Ontology preprocessing: transform all classes names to lower case bug Something isn't working
#60 opened Nov 29, 2024 by clalaudy
Ontology preprocessing: Add "entity" class if it doesn't exist in the initial ontology bug Something isn't working
#59 opened Nov 29, 2024 by clalaudy
Biocypher does not connect types from tail ontologies (Gene Ontology example) biocypher Bug related to BioCypher
#28 opened Aug 6, 2024 by kgaydukova
test_simplest doesn't run when the remote ontology is not available biocypher Bug related to BioCypher bug Something isn't working
#13 opened Mar 25, 2024 by clairelaudy
1
Source/target in schema_config.yaml don't impact on direction of the edges biocypher Bug related to BioCypher bug Something isn't working
#1 opened Feb 28, 2024 by kgaydukova OntoWeaver 1.0
@mbaric758 @jdreo
ProTip! Find all open issues with in progress development work with linked:pr.