Python: replace pybind11 with nanobind #2372
Workflow file for this run
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| name: CI | |
| on: | |
| pull_request: | |
| branches: [ main ] | |
| workflow_dispatch: | |
| jobs: | |
| ci: | |
| name: ${{ matrix.name }} | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| include: | |
| # - name: 'Windows static library' | |
| # os: windows-latest | |
| # build_type: Release | |
| # code_analysis: OFF | |
| # code_coverage: OFF | |
| # documentation: OFF | |
| # javascript_bindings: OFF | |
| # javascript_unit_testing: OFF | |
| # memory_checks: OFF | |
| # python_bindings: OFF | |
| # python_unit_testing: OFF | |
| # shared_libs: OFF | |
| # unit_testing: ON | |
| # target: unit_testing | |
| # install_uninstall_and_package: ON | |
| # - name: 'Windows shared library' | |
| # os: windows-latest | |
| # build_type: Release | |
| # code_analysis: OFF | |
| # code_coverage: OFF | |
| # documentation: OFF | |
| # javascript_bindings: OFF | |
| # javascript_unit_testing: OFF | |
| # memory_checks: OFF | |
| # python_bindings: OFF | |
| # python_unit_testing: OFF | |
| # shared_libs: ON | |
| # unit_testing: ON | |
| # target: unit_testing | |
| # install_uninstall_and_package: ON | |
| # - name: 'Linux static library' | |
| # os: ubuntu-latest | |
| # build_type: Release | |
| # code_analysis: OFF | |
| # code_coverage: OFF | |
| # documentation: OFF | |
| # javascript_bindings: OFF | |
| # javascript_unit_testing: OFF | |
| # memory_checks: OFF | |
| # python_bindings: OFF | |
| # python_unit_testing: OFF | |
| # shared_libs: OFF | |
| # unit_testing: ON | |
| # target: unit_testing | |
| # install_uninstall_and_package: ON | |
| # - name: 'Linux shared library' | |
| # os: ubuntu-latest | |
| # build_type: Release | |
| # code_analysis: OFF | |
| # code_coverage: OFF | |
| # documentation: OFF | |
| # javascript_bindings: OFF | |
| # javascript_unit_testing: OFF | |
| # memory_checks: OFF | |
| # python_bindings: OFF | |
| # python_unit_testing: OFF | |
| # shared_libs: ON | |
| # unit_testing: ON | |
| # target: unit_testing | |
| # install_uninstall_and_package: ON | |
| # - name: 'macOS static library (Intel)' | |
| # os: macos-13 | |
| # build_type: Release | |
| # code_analysis: OFF | |
| # code_coverage: OFF | |
| # documentation: OFF | |
| # javascript_bindings: OFF | |
| # javascript_unit_testing: OFF | |
| # memory_checks: OFF | |
| # python_bindings: OFF | |
| # python_unit_testing: OFF | |
| # shared_libs: OFF | |
| # unit_testing: ON | |
| # target: unit_testing | |
| # install_uninstall_and_package: ON | |
| # - name: 'macOS shared library (Intel)' | |
| # os: macos-13 | |
| # build_type: Release | |
| # code_analysis: OFF | |
| # code_coverage: OFF | |
| # documentation: OFF | |
| # javascript_bindings: OFF | |
| # javascript_unit_testing: OFF | |
| # memory_checks: OFF | |
| # python_bindings: OFF | |
| # python_unit_testing: OFF | |
| # shared_libs: ON | |
| # unit_testing: ON | |
| # target: unit_testing | |
| # install_uninstall_and_package: ON | |
| # - name: 'macOS static library (ARM)' | |
| # os: macos-latest | |
| # build_type: Release | |
| # code_analysis: OFF | |
| # code_coverage: OFF | |
| # documentation: OFF | |
| # javascript_bindings: OFF | |
| # javascript_unit_testing: OFF | |
| # memory_checks: OFF | |
| # python_bindings: OFF | |
| # python_unit_testing: OFF | |
| # shared_libs: OFF | |
| # unit_testing: ON | |
| # target: unit_testing | |
| # install_uninstall_and_package: ON | |
| # - name: 'macOS shared library (ARM)' | |
| # os: macos-latest | |
| # build_type: Release | |
| # code_analysis: OFF | |
| # code_coverage: OFF | |
| # documentation: OFF | |
| # javascript_bindings: OFF | |
| # javascript_unit_testing: OFF | |
| # memory_checks: OFF | |
| # python_bindings: OFF | |
| # python_unit_testing: OFF | |
| # shared_libs: ON | |
| # unit_testing: ON | |
| # target: unit_testing | |
| # install_uninstall_and_package: ON | |
| # - name: 'JavaScript bindings' | |
| # os: macos-latest | |
| # build_type: Release | |
| # code_analysis: OFF | |
| # code_coverage: OFF | |
| # documentation: OFF | |
| # javascript_bindings: ON | |
| # javascript_unit_testing: ON | |
| # memory_checks: OFF | |
| # python_bindings: OFF | |
| # python_unit_testing: OFF | |
| # shared_libs: OFF | |
| # unit_testing: OFF | |
| # target: javascript_unit_testing | |
| # - name: 'Windows Python bindings' | |
| # os: windows-latest | |
| # build_type: Release | |
| # code_analysis: OFF | |
| # code_coverage: OFF | |
| # documentation: OFF | |
| # javascript_bindings: OFF | |
| # javascript_unit_testing: OFF | |
| # memory_checks: OFF | |
| # python_bindings: ON | |
| # python_unit_testing: ON | |
| # shared_libs: OFF | |
| # unit_testing: OFF | |
| # target: python_unit_testing | |
| # pip_install_test_and_uninstall: ON | |
| - name: 'Linux Python bindings' | |
| os: ubuntu-latest | |
| build_type: Release | |
| code_analysis: OFF | |
| code_coverage: OFF | |
| documentation: OFF | |
| javascript_bindings: OFF | |
| javascript_unit_testing: OFF | |
| memory_checks: OFF | |
| python_bindings: ON | |
| python_unit_testing: ON | |
| shared_libs: OFF | |
| unit_testing: OFF | |
| target: python_unit_testing | |
| pip_install_test_and_uninstall: ON | |
| # - name: 'macOS Python bindings (Intel)' | |
| # os: macos-13 | |
| # build_type: Release | |
| # code_analysis: OFF | |
| # code_coverage: OFF | |
| # documentation: OFF | |
| # javascript_bindings: OFF | |
| # javascript_unit_testing: OFF | |
| # memory_checks: OFF | |
| # python_bindings: ON | |
| # python_unit_testing: ON | |
| # shared_libs: OFF | |
| # unit_testing: OFF | |
| # context: PATH=/Library/Frameworks/Python.framework/Versions/Current/bin:$PATH | |
| # target: python_unit_testing | |
| # pip_install_prerequisites: sudo pip3 install cmake scikit-build | |
| # pip_install_test_and_uninstall: ON | |
| # - name: 'macOS Python bindings (ARM)' | |
| # os: macos-latest | |
| # build_type: Release | |
| # code_analysis: OFF | |
| # code_coverage: OFF | |
| # documentation: OFF | |
| # javascript_bindings: OFF | |
| # javascript_unit_testing: OFF | |
| # memory_checks: OFF | |
| # python_bindings: ON | |
| # python_unit_testing: ON | |
| # shared_libs: OFF | |
| # unit_testing: OFF | |
| # context: PATH=/Library/Frameworks/Python.framework/Versions/Current/bin:$PATH | |
| # target: python_unit_testing | |
| # pip_install_prerequisites: sudo pip3 install cmake scikit-build | |
| # pip_install_test_and_uninstall: ON | |
| # - name: 'Code formatting' | |
| # os: ubuntu-latest | |
| # build_type: Release | |
| # code_analysis: OFF | |
| # code_coverage: OFF | |
| # documentation: OFF | |
| # javascript_bindings: OFF | |
| # javascript_unit_testing: OFF | |
| # memory_checks: OFF | |
| # python_bindings: OFF | |
| # python_unit_testing: OFF | |
| # shared_libs: OFF | |
| # unit_testing: OFF | |
| # context: PATH=$GITHUB_WORKSPACE:$PATH | |
| # target: check_code_formatting | |
| # - name: 'JavaScript code formatting' | |
| # os: macos-latest | |
| # build_type: Release | |
| # code_analysis: OFF | |
| # code_coverage: OFF | |
| # documentation: OFF | |
| # javascript_bindings: OFF | |
| # javascript_unit_testing: OFF | |
| # memory_checks: OFF | |
| # python_bindings: OFF | |
| # python_unit_testing: OFF | |
| # shared_libs: OFF | |
| # unit_testing: OFF | |
| # target: javascript_check_code_formatting | |
| # - name: 'Python code formatting' | |
| # os: ubuntu-latest | |
| # build_type: Release | |
| # code_analysis: OFF | |
| # code_coverage: OFF | |
| # documentation: OFF | |
| # javascript_bindings: OFF | |
| # javascript_unit_testing: OFF | |
| # memory_checks: OFF | |
| # python_bindings: OFF | |
| # python_unit_testing: OFF | |
| # shared_libs: OFF | |
| # unit_testing: OFF | |
| # target: python_check_code_formatting | |
| # - name: 'Code analysis' | |
| # os: ubuntu-latest | |
| # build_type: Release | |
| # code_analysis: ON | |
| # code_coverage: OFF | |
| # documentation: OFF | |
| # javascript_bindings: OFF | |
| # javascript_unit_testing: OFF | |
| # memory_checks: OFF | |
| # python_bindings: OFF | |
| # python_unit_testing: OFF | |
| # shared_libs: OFF | |
| # unit_testing: ON | |
| # context: PATH=$GITHUB_WORKSPACE:$PATH CC=/usr/local/bin/clang CXX=/usr/local/bin/clang++ | |
| # - name: 'Code coverage' | |
| # os: macos-latest | |
| # build_type: Release | |
| # code_analysis: OFF | |
| # code_coverage: ON | |
| # documentation: OFF | |
| # javascript_bindings: OFF | |
| # javascript_unit_testing: OFF | |
| # memory_checks: OFF | |
| # python_bindings: OFF | |
| # python_unit_testing: OFF | |
| # shared_libs: ON | |
| # unit_testing: ON | |
| # context: PATH=/opt/homebrew/opt/llvm/bin:$PATH CC=/opt/homebrew/opt/llvm/bin/clang CXX=/opt/homebrew/opt/llvm/bin/clang++ | |
| # target: code_coverage | |
| # - name: 'Memory checks' | |
| # os: ubuntu-latest | |
| # build_type: Debug | |
| # code_analysis: OFF | |
| # code_coverage: OFF | |
| # documentation: OFF | |
| # javascript_bindings: OFF | |
| # javascript_unit_testing: OFF | |
| # memory_checks: ON | |
| # python_bindings: OFF | |
| # python_unit_testing: OFF | |
| # shared_libs: ON | |
| # unit_testing: ON | |
| # target: memory_checks | |
| # - name: 'Documentation' | |
| # os: ubuntu-latest | |
| # build_type: Release | |
| # code_analysis: OFF | |
| # code_coverage: OFF | |
| # documentation: ON | |
| # javascript_bindings: OFF | |
| # javascript_unit_testing: OFF | |
| # memory_checks: OFF | |
| # python_bindings: OFF | |
| # python_unit_testing: OFF | |
| # shared_libs: OFF | |
| # unit_testing: OFF | |
| # target: documentation | |
| env: | |
| BUILDCACHE_ACCURACY: STRICT | |
| BUILDCACHE_COMPRESS_FORMAT: ZSTD | |
| BUILDCACHE_DEBUG: -1 | |
| BUILDCACHE_LOG_FILE: "" | |
| DOXYGEN_VERSION: 1.9.3 | |
| LLVMCLANG_VERSION: 18.1.8 | |
| steps: | |
| - name: Check out libOpenCOR | |
| uses: actions/checkout@v4 | |
| - name: Install Python | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: '3.12' | |
| - name: Install CMake and Ninja | |
| uses: lukka/get-cmake@latest | |
| - name: Install buildcache | |
| uses: cscouto/buildcache-action@v1 | |
| with: | |
| cache_key: ${{ matrix.os }}-${{ matrix.build_type }}-${{ matrix.code_analysis }}-${{ matrix.code_coverage }}-${{ matrix.documentation }}-${{ matrix.javascript_bindings }}-${{ matrix.javascript_unit_testing }}-${{ matrix.memory_checks }}-${{ matrix.python_bindings }}-${{ matrix.python_unit_testing }}-${{ matrix.shared_libs }}-${{ matrix.unit_testing }}-${{ matrix.target }} | |
| - name: Configure MSVC | |
| if: ${{ runner.os == 'Windows' }} | |
| uses: ilammy/msvc-dev-cmd@v1 | |
| - name: Install LLVM | |
| if: ${{ matrix.code_coverage == 'ON' }} | |
| run: | | |
| brew install --overwrite llvm | |
| brew info llvm | |
| - name: Install Clang | |
| if: ${{ matrix.code_analysis == 'ON' }} | |
| run: | | |
| wget https://github.com/opencor/gha/releases/download/gha/clang.${LLVMCLANG_VERSION}.linux.tar.gz -O - | tar -xz | |
| sudo mv clang /usr/local/bin | |
| sudo cp /usr/local/bin/clang /usr/local/bin/clang++ | |
| wget https://github.com/opencor/gha/releases/download/gha/clang-include.${LLVMCLANG_VERSION}.linux.tar.gz -O - | tar -xz | |
| sudo mv include/* /usr/local/include | |
| - name: Install ClangFormat | |
| if: ${{ matrix.target == 'check_code_formatting' }} | |
| run: | | |
| wget https://github.com/opencor/gha/releases/download/gha/clang-format.${LLVMCLANG_VERSION}.linux.tar.gz -O - | tar -xz | |
| sudo mv clang-format /usr/local/bin | |
| - name: Install Clang-Tidy | |
| if: ${{ matrix.name == 'Code analysis' }} | |
| run: | | |
| wget https://github.com/opencor/gha/releases/download/gha/clang-tidy.${LLVMCLANG_VERSION}.linux.tar.gz -O - | tar -xz | |
| sudo mv clang-tidy /usr/local/bin | |
| - name: Install Emscripten | |
| if: ${{ matrix.javascript_unit_testing == 'ON' }} | |
| run: brew install --overwrite emscripten | |
| - name: Install Prettier | |
| if: ${{ matrix.target == 'javascript_check_code_formatting' }} | |
| run: brew install --overwrite prettier | |
| - name: Install Black | |
| if: ${{ matrix.target == 'python_check_code_formatting' }} | |
| run: pip3 install black | |
| - name: Install Valgrind | |
| if: ${{ matrix.memory_checks == 'ON' }} | |
| run: | | |
| sudo apt update | |
| sudo apt install valgrind | |
| - name: Install pytest and pytest-html | |
| if: ${{ matrix.python_unit_testing == 'ON' }} | |
| run: pip3 install pytest pytest-html | |
| - name: Install Sphinx and some Sphinx packages | |
| if: ${{ matrix.documentation == 'ON' }} | |
| run: pip3 install sphinx sphinx-copybutton sphinx-inline-tabs | |
| - name: Install Doxygen | |
| if: ${{ matrix.documentation == 'ON' }} | |
| run: | | |
| wget https://github.com/opencor/gha/releases/download/gha/doxygen.${DOXYGEN_VERSION}.linux.tar.gz -O - | tar -xz | |
| sudo mv doxygen /usr/local/bin | |
| - name: Configure libOpenCOR | |
| run: | | |
| mkdir build | |
| cd build | |
| ${{ matrix.context }} cmake -G Ninja -DBUILD_TYPE=${{ matrix.build_type }} -DCODE_ANALYSIS=${{ matrix.code_analysis }} -DCODE_COVERAGE=${{ matrix.code_coverage }} -DDOCUMENTATION=${{ matrix.documentation }} -DINSTALL_PREFIX=${{ github.workspace }}/install -DJAVASCRIPT_BINDINGS=${{ matrix.javascript_bindings }} -DJAVASCRIPT_UNIT_TESTING=${{ matrix.javascript_unit_testing }} -DMEMORY_CHECKS=${{ matrix.memory_checks }} -DPYTHON_BINDINGS=${{ matrix.python_bindings }} -DPYTHON_UNIT_TESTING=${{ matrix.python_unit_testing }} -DSHARED_LIBS=${{ matrix.shared_libs }} -DUNIT_TESTING=${{ matrix.unit_testing }} .. | |
| - name: Build libOpenCOR | |
| if: ${{ (matrix.unit_testing == 'ON') || (matrix.javascript_unit_testing == 'ON') || (matrix.code_analysis == 'OFF') || (matrix.code_coverage == 'OFF') || (matrix.memory_checks == 'OFF') }} | |
| run: | | |
| cd build | |
| ninja | |
| - name: Unit testing | |
| if: ${{ (matrix.unit_testing == 'ON') && (matrix.code_analysis == 'OFF') && (matrix.code_coverage == 'OFF') && (matrix.memory_checks == 'OFF') }} | |
| run: | | |
| cd build | |
| ninja ${{ matrix.target }} | |
| - name: JavaScript unit testing | |
| if: ${{ matrix.javascript_unit_testing == 'ON' }} | |
| run: | | |
| cd build | |
| ninja ${{ matrix.target }} | |
| - name: Python unit testing | |
| if: ${{ matrix.python_unit_testing == 'ON' }} | |
| run: | | |
| cd build | |
| ninja ${{ matrix.target }} | |
| - name: Python unit testing report | |
| if: ${{ matrix.python_unit_testing == 'ON' }} | |
| run: | | |
| cd build | |
| ninja ${{ matrix.target }}_report | |
| - name: Code formatting | |
| if: ${{ matrix.target == 'check_code_formatting' }} | |
| run: | | |
| cd build | |
| ninja ${{ matrix.target }} | |
| - name: JavaScript code formatting | |
| if: ${{ matrix.target == 'javascript_check_code_formatting' }} | |
| run: | | |
| cd build | |
| ninja ${{ matrix.target }} | |
| - name: Python code formatting | |
| if: ${{ matrix.target == 'python_check_code_formatting' }} | |
| run: | | |
| cd build | |
| ninja ${{ matrix.target }} | |
| - name: Code analysis | |
| if: ${{ matrix.name == 'Code analysis' }} | |
| run: | | |
| cd build | |
| ninja | |
| - name: Coverage | |
| if: ${{ matrix.code_coverage == 'ON' }} | |
| run: | | |
| cd build | |
| ninja ${{ matrix.target }} | |
| if [ `ninja ${{ matrix.target }} | grep TOTAL | sed 's/ /\n/g' | grep "100.00%" | wc -l | sed 's/ //g'` -eq 4 ]; then exit 0; else exit 1; fi | |
| - name: Coverage report | |
| if: ${{ matrix.code_coverage == 'ON' }} | |
| run: | | |
| cd build | |
| ninja ${{ matrix.target }}_report | |
| - name: Memory checks | |
| if: ${{ matrix.memory_checks == 'ON' }} | |
| run: | | |
| cd build | |
| ninja ${{ matrix.target }} | |
| - name: Documentation | |
| if: ${{ matrix.documentation == 'ON' }} | |
| run: | | |
| cd build | |
| ninja ${{ matrix.target }} | |
| - name: Install libOpenCOR | |
| if: ${{ matrix.install_uninstall_and_package == 'ON' }} | |
| run: | | |
| cd build | |
| ninja install | |
| - name: Uninstall libOpenCOR | |
| if: ${{ matrix.install_uninstall_and_package == 'ON' }} | |
| run: | | |
| cd build | |
| ninja uninstall | |
| - name: Package libOpenCOR | |
| if: ${{ matrix.install_uninstall_and_package == 'ON' }} | |
| run: | | |
| cd build | |
| cpack | |
| - name: pip install libOpenCOR | |
| if: ${{ matrix.pip_install_test_and_uninstall == 'ON' }} | |
| run: | | |
| ${{ matrix.pip_install_prerequisites }} | |
| pip3 install . | |
| - name: Test libOpenCOR Python | |
| if: ${{ matrix.pip_install_test_and_uninstall == 'ON' }} | |
| run: python3 -c "import libopencor as oc; print(f'This is libOpenCOR version {oc.version_string()}.')" | |
| - name: pip uninstall libOpenCOR | |
| if: ${{ matrix.pip_install_test_and_uninstall == 'ON' }} | |
| run: pip3 uninstall -y libopencor | |
| # spell_check: | |
| # name: Spell check | |
| # runs-on: ubuntu-latest | |
| # steps: | |
| # - name: Check out libOpenCOR | |
| # uses: actions/checkout@v4 | |
| # - name: Spell check | |
| # uses: codespell-project/actions-codespell@v2 | |
| # with: | |
| # check_filenames: true | |
| # skip: ./extern | |
| # exclude_file: .codespellexclude |