update docker build relevant

.github/workflows/statistician-image.yml

@@ -24,6 +24,7 @@ on:
 permissions:
   id-token: write   # This is required for requesting the JWT
   contents: read    # This is required for actions/checkout
+  packages: write  # This is required for pushing to ghcr
 
 jobs:
   test:
@@ -97,16 +98,18 @@ jobs:
       && (needs.set_tags.outputs.image_tag)
     needs: [test, set_tags]
     runs-on: ubuntu-latest
+
     steps:
       - name: Checkout code
         uses: actions/checkout@v3
 
-      - name: Push image to dockerhub
+      - name: Push image to ghcr
         uses: whoan/docker-build-with-cache-action@master
         with:
           context: ./docker
-          username: gadockersvc
-          password: ${{ secrets.GADOCKERSVC_PASSWORD }}
-          image_name: ${{ env.IMAGE_NAME }}
+          registry: ghcr.io
+          username: ${{ github.actor }}
+          password: ${{ secrets.GITHUB_TOKEN }}
+          image_name: ${{ github.repository }}
           image_tag: latest,${{ needs.set_tags.outputs.image_tag }}
           build_extra_args: '{"--build-arg": "UPDATE_VERSION=${{ needs.set_tags.outputs.image_tag }}"}'

docker/env.yaml

@@ -131,7 +131,7 @@ dependencies:
   - urlpath
   - Werkzeug
   - wrapt
-  - xarray>=2023.1.0
+  - xarray>=2023.7.0
   - yarl
   - zict
   - zipp

docker/requirements.txt

@@ -2,13 +2,13 @@
 --extra-index-url https://packages.dea.ga.gov.au/
 datacube[performance,s3]>=1.8.17
 hdstats==0.1.8.post1
-odc-algo @ git+https://github.com/opendatacube/odc-algo@b8dcfce
+odc-algo @ git+https://github.com/opendatacube/odc-algo@851e782
 odc-apps-cloud==0.2.2
 # For testing
 odc-apps-dc-tools==0.2.12
 odc-cloud==0.2.3
 odc-dscache==0.2.2
-odc-stac==0.3.6
+odc-stac==0.3.8
 
 # odc-stac is in PyPI
 odc-stats[ows]

odc/stats/plugins/gm.py

@@ -29,6 +29,7 @@ def __init__(
         ] = None,
         basis_band=None,
         aux_names: Dict[str, str] = None,
+        resampling: str = "nearest",
         work_chunks: Tuple[int, int] = (400, 400),
         **kwargs,
     ):
@@ -43,6 +44,7 @@ def __init__(
         if nodata_classes is not None:
             nodata_classes = tuple(nodata_classes)
         self._nodata_classes = nodata_classes
+        self.resampling = resampling
         input_bands = self.bands
         if self._nodata_classes is not None:
             # NOTE: this ends up loading Mask band twice, once to compute
@@ -52,6 +54,7 @@ def __init__(
         super().__init__(
             input_bands=input_bands,
             basis=basis_band or self.bands[0],
+            resampling=self.resampling,
             **kwargs,
         )
 

tests/requirements.txt

@@ -1,13 +1,13 @@
 --extra-index-url https://packages.dea.ga.gov.au/
-datacube>=1.8.17
+datacube!=1.8.14
 # for pytest-depends
 deepdiff
 future_fstrings
 mock
 moto
 networkx
 numpy
-odc-algo
+odc-algo==0.2.4.dev3628
 odc-stac
 
 # For tests
@@ -17,4 +17,4 @@ pytest-httpserver
 pytest-timeout
 
 # patch image
-xarray>=2023.7.0
+xarray>=2023.1.0

tests/test_gm_ls.py

@@ -177,7 +177,7 @@ def test_resampling(dataset):
 
     dataset = dataset.copy()
     stats_gmls = StatsGMLS(cloud_filters=mask_filters, nodata_classes=(-999,))
-    assert stats_gmls.resampling == "bilinear"
+    assert stats_gmls.resampling == "nearest"
 
 
 def test_no_data_value(monkeypatch):