chore: Upgrade Python requirements

[edx-requirements-bot]

Python requirements update. Please review the changelogs for the upgraded packages.

Deleted obsolete pull_requests:
#1020

[edx-requirements-bot]

List of packages in the PR without any issue.

• anyio changes from 4.7.0 to 4.8.0
• astroid changes from 3.3.6 to 3.3.8
• attrs changes from 24.2.0 to 24.3.0
• charset-normalizer changes from 3.4.0 to 3.4.1
• click changes from 8.1.7 to 8.1.8
• coverage[toml] changes from 7.6.9 to 7.6.10
• faker changes from 33.1.0 to 33.3.0
• jinja2 changes from 3.1.4 to 3.1.5
• nh3 changes from 0.2.19 to 0.2.20
• numpy changes from 2.2.0 to 2.2.1
• psutil changes from 6.1.0 to 6.1.1
• pydantic changes from 2.10.3 to 2.10.4
• pydantic-core changes from 2.27.1 to 2.27.2
• pydata-sphinx-theme changes from 0.16.0 to 0.16.1
• pygments changes from 2.18.0 to 2.19.0
• pylint changes from 3.3.2 to 3.3.3
• scipy changes from 1.14.1 to 1.15.0
• setuptools changes from 75.6.0 to 75.7.0
• urllib3 changes from 2.2.3 to 2.3.0
• virtualenv changes from 20.28.0 to 20.28.1