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[PRE REVIEW]: medrxivr: Accessing and searching medRxiv and bioRxiv preprint data in R #2647

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whedon opened this issue Sep 8, 2020 · 15 comments
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pre-review R rOpenSci Submissions associated with rOpenSci TeX

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@whedon
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whedon commented Sep 8, 2020

Submitting author: @mcguinlu (Luke A McGuinness)
Repository: https://github.com/ropensci/medrxivr
Version: v0.0.3
Editor: @danielskatz
Reviewers: @danielskatz
Managing EiC: Daniel S. Katz

⚠️ JOSS reduced service mode ⚠️

Due to the challenges of the COVID-19 pandemic, JOSS is currently operating in a "reduced service mode". You can read more about what that means in our blog post.

Author instructions

Thanks for submitting your paper to JOSS @mcguinlu. Currently, there isn't an JOSS editor assigned to your paper.

@mcguinlu if you have any suggestions for potential reviewers then please mention them here in this thread (without tagging them with an @). In addition, this list of people have already agreed to review for JOSS and may be suitable for this submission (please start at the bottom of the list).

Editor instructions

The JOSS submission bot @whedon is here to help you find and assign reviewers and start the main review. To find out what @whedon can do for you type:

@whedon commands
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whedon commented Sep 8, 2020

Hello human, I'm @whedon, a robot that can help you with some common editorial tasks.

⚠️ JOSS reduced service mode ⚠️

Due to the challenges of the COVID-19 pandemic, JOSS is currently operating in a "reduced service mode". You can read more about what that means in our blog post.

For a list of things I can do to help you, just type:

@whedon commands

For example, to regenerate the paper pdf after making changes in the paper's md or bib files, type:

@whedon generate pdf

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whedon commented Sep 8, 2020

Reference check summary (note 'MISSING' DOIs are suggestions that need verification):

OK DOIs

- 10.22541/au.158516578.89167184 is OK
- 10.1136/bmj.l2301 is OK

MISSING DOIs

- None

INVALID DOIs

- None

@whedon
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whedon commented Sep 8, 2020

Failed to discover a Statement of need section in paper

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whedon commented Sep 8, 2020

Software report (experimental):

github.com/AlDanial/cloc v 1.84  T=0.14 s (244.9 files/s, 15396.9 lines/s)
-------------------------------------------------------------------------------
Language                     files          blank        comment           code
-------------------------------------------------------------------------------
R                               18            169            252            633
Markdown                         5             76              0            212
YAML                             6             45              9            167
Rmd                              4            173            274            100
TeX                              1              4              0             24
-------------------------------------------------------------------------------
SUM:                            34            467            535           1136
-------------------------------------------------------------------------------


Statistical information for the repository '2647' was gathered on 2020/09/08.
No commited files with the specified extensions were found.

@whedon
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whedon commented Sep 8, 2020

@danielskatz
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@whedon query scope

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whedon commented Sep 8, 2020

Submission flagged for editorial review.

@whedon whedon added the query-scope Submissions of uncertain scope for JOSS label Sep 8, 2020
@mcguinlu
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mcguinlu commented Sep 8, 2020 via email

@danielskatz danielskatz added rOpenSci Submissions associated with rOpenSci and removed query-scope Submissions of uncertain scope for JOSS labels Sep 8, 2020
@danielskatz
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Ok, thanks - that's important to know, as it changes the path forward

@danielskatz
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@whedon assign @danielskatz as editor

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whedon commented Sep 8, 2020

OK, the editor is @danielskatz

@danielskatz
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@whedon assign @danielskatz as reviewer

@whedon whedon assigned danielskatz and unassigned danielskatz Sep 8, 2020
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whedon commented Sep 8, 2020

OK, @danielskatz is now a reviewer

@danielskatz
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@whedon start review

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whedon commented Sep 8, 2020

OK, I've started the review over in #2651.

@whedon whedon closed this as completed Sep 8, 2020
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