Add BALTRAD (#39)

openradar · Jul 3, 2024 · f561722 · f561722
1 parent 1220f76
commit f561722
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Showing 11 changed files with 102 additions and 7 deletions.
diff --git a/binder/appendix.txt b/binder/appendix.txt
@@ -16,4 +16,5 @@ RUN CONDA_DIR=/srv/conda && \
     echo "export RADARENV=$RADARENV" >> ~/.profile && \
     echo "export CONDA_PREFIX=$CONDA_PREFIX" >> ~/.profile && \
     echo "export PROJ_NETWORK=$PROJ_NETWORK" >> ~/.profile && \
+    ${CONDA_PREFIX}/bin/bash -l $BALTRAD_INSTALL_ROOT/install/baltrad/install_baltrad.sh && \
     cp binder/kernel.json $CONDA_PREFIX/share/jupyter/kernels/python3/.
diff --git a/install/baltrad/fix_macro_beamb.patch b/install/baltrad/fix_macro_beamb.patch
@@ -0,0 +1,13 @@
+diff --git a/pybeamb/pybeamb_compat.h b/pybeamb/pybeamb_compat.h
+index 3caf9cd..49b79ea 100644
+--- a/pybeamb/pybeamb_compat.h
++++ b/pybeamb/pybeamb_compat.h
+@@ -73,7 +73,7 @@ along with RAVE.  If not, see <http://www.gnu.org/licenses/>.
+ #define MOD_INIT_CREATE_CAPI(ptr, name) PyCapsule_New(ptr, name, NULL)
+ #define MOD_INIT_IS_CAPI(ptr) PyCapsule_CheckExact(ptr)
+ #define MOD_INIT_GET_CAPI(ptr, name) PyCapsule_GetPointer(ptr, name)
+-#define MOD_INIT_SETUP_TYPE(itype, otype) Py_TYPE(&itype) = otype
++#define MOD_INIT_SETUP_TYPE(itype, otype) Py_SET_TYPE(&itype, otype)
+ #define MOD_INIT_VERIFY_TYPE_READY(type) if (PyType_Ready(type) < 0) return MOD_INIT_ERROR
+
+ #else
diff --git a/install/baltrad/fix_macro_bropo.patch b/install/baltrad/fix_macro_bropo.patch
@@ -0,0 +1,13 @@
+diff --git a/pyropo/pyropo_compat.h b/pyropo/pyropo_compat.h
+index 9fdd586..5be12c0 100644
+--- a/pyropo/pyropo_compat.h
++++ b/pyropo/pyropo_compat.h
+@@ -73,7 +73,7 @@ along with RAVE.  If not, see <http://www.gnu.org/licenses/>.
+ #define MOD_INIT_CREATE_CAPI(ptr, name) PyCapsule_New(ptr, name, NULL)
+ #define MOD_INIT_IS_CAPI(ptr) PyCapsule_CheckExact(ptr)
+ #define MOD_INIT_GET_CAPI(ptr, name) PyCapsule_GetPointer(ptr, name)
+-#define MOD_INIT_SETUP_TYPE(itype, otype) Py_TYPE(&itype) = otype
++#define MOD_INIT_SETUP_TYPE(itype, otype) Py_SET_TYPE(&itype, otype)
+ #define MOD_INIT_VERIFY_TYPE_READY(type) if (PyType_Ready(type) < 0) return MOD_INIT_ERROR
+
+ #else
diff --git a/install/baltrad/fix_macro_rave.patch b/install/baltrad/fix_macro_rave.patch
@@ -0,0 +1,13 @@
+diff --git a/librave/pyapi/pyravecompat.h b/librave/pyapi/pyravecompat.h
+index 846e7a7..8167bfa 100644
+--- a/librave/pyapi/pyravecompat.h
++++ b/librave/pyapi/pyravecompat.h
+@@ -86,7 +86,7 @@ PyObject* PyRaveAPI_StringOrUnicode_FromASCII(const char *buffer);
+ #define MOD_INIT_CREATE_CAPI(ptr, name) PyCapsule_New(ptr, name, NULL)
+ #define MOD_INIT_IS_CAPI(ptr) PyCapsule_CheckExact(ptr)
+ #define MOD_INIT_GET_CAPI(ptr, name) PyCapsule_GetPointer(ptr, name)
+-#define MOD_INIT_SETUP_TYPE(itype, otype) Py_TYPE(&itype) = otype
++#define MOD_INIT_SETUP_TYPE(itype, otype) Py_SET_TYPE(&itype, otype)
+ #define MOD_INIT_VERIFY_TYPE_READY(type) if (PyType_Ready(type) < 0) return MOD_INIT_ERROR
+
+ #else
diff --git a/install/baltrad/fix_macro_type_hlhdf.patch b/install/baltrad/fix_macro_type_hlhdf.patch
@@ -0,0 +1,37 @@
+diff --git a/pyhlhdf/pyhlcompat.h b/pyhlhdf/pyhlcompat.h
+index aadbdac..73ad6b9 100644
+--- a/pyhlhdf/pyhlcompat.h
++++ b/pyhlhdf/pyhlcompat.h
+@@ -82,7 +82,7 @@ PyObject* PyHlhdf_StringOrUnicode_FromASCII(const char *buffer, Py_ssize_t size)
+     PyModuleDef_HEAD_INIT, name, doc, -1, methods, NULL, NULL, NULL, NULL }; \
+     ob = PyModule_Create(&moduledef);
+
+-#define MOD_INIT_SETUP_TYPE(itype, otype) Py_TYPE(&itype) = otype
++#define MOD_INIT_SETUP_TYPE(itype, otype) Py_SET_TYPE(&itype, otype)
+ #define MOD_INIT_VERIFY_TYPE_READY(type) if (PyType_Ready(type) < 0) return MOD_INIT_ERROR
+
+ #else
+diff --git a/test/python/rave_info_type.c b/test/python/rave_info_type.c
+index 5451301..9ac225b 100644
+--- a/test/python/rave_info_type.c
++++ b/test/python/rave_info_type.c
+@@ -334,7 +334,8 @@ static PyTypeObject RaveInfoType_Type = {
+     (getattrofunc)_getattr_typeo, /*tp_getattro*/
+     (setattrofunc)0,              /*tp_setattro*/
+     0,                            /*tp_as_buffer*/
+-    Py_TPFLAGS_DEFAULT | Py_TPFLAGS_HAVE_GC, /*tp_flags*/
++    Py_TPFLAGS_DEFAULT, /*tp_flags*/
++    //Py_TPFLAGS_DEFAULT | Py_TPFLAGS_HAVE_GC, /*tp_flags*/
+     0,                            /*tp_doc*/
+     (traverseproc)0,              /*tp_traverse*/
+     (inquiry)0,                   /*tp_clear*/
+@@ -378,7 +379,8 @@ static PyTypeObject RaveInfoObject_Type = {
+     (getattrofunc)_getattro_object,/*tp_getattro*/
+     (setattrofunc)_setattro_object,/*tp_setattro*/
+     0,                            /*tp_as_buffer*/
+-    Py_TPFLAGS_DEFAULT | Py_TPFLAGS_HAVE_GC, /*tp_flags*/
++    //Py_TPFLAGS_DEFAULT | Py_TPFLAGS_HAVE_GC, /*tp_flags*/
++    Py_TPFLAGS_DEFAULT, /*tp_flags*/
+     0,                            /*tp_doc*/
+     (traverseproc)0,              /*tp_traverse*/
+     (inquiry)0,                   /*tp_clear*/
diff --git a/install/baltrad/fix_macro_wrwp.patch b/install/baltrad/fix_macro_wrwp.patch
@@ -0,0 +1,13 @@
+diff --git a/pywrwp/pywrwp_compat.h b/pywrwp/pywrwp_compat.h
+index 3caf9cd..49b79ea 100644
+--- a/pywrwp/pywrwp_compat.h
++++ b/pywrwp/pywrwp_compat.h
+@@ -73,7 +73,7 @@ along with RAVE.  If not, see <http://www.gnu.org/licenses/>.
+ #define MOD_INIT_CREATE_CAPI(ptr, name) PyCapsule_New(ptr, name, NULL)
+ #define MOD_INIT_IS_CAPI(ptr) PyCapsule_CheckExact(ptr)
+ #define MOD_INIT_GET_CAPI(ptr, name) PyCapsule_GetPointer(ptr, name)
+-#define MOD_INIT_SETUP_TYPE(itype, otype) Py_TYPE(&itype) = otype
++#define MOD_INIT_SETUP_TYPE(itype, otype) Py_SET_TYPE(&itype, otype)
+ #define MOD_INIT_VERIFY_TYPE_READY(type) if (PyType_Ready(type) < 0) return MOD_INIT_ERROR
+
+ #else
diff --git a/install/baltrad/install_baltrad_beamb.sh b/install/baltrad/install_baltrad_beamb.sh
@@ -12,13 +12,14 @@ export LD_LIBRARY_PATH=$CONDA_PREFIX/lib:$CONDA_PREFIX/hlhdf/lib:$CONDA_PREFIX/r
 cd $BALTRAD_INSTALL_ROOT/tmp
 git clone --depth=1 https://github.com/baltrad/beamb.git
 cd beamb/
+git apply $BALTRAD_INSTALL_ROOT/install/baltrad/fix_macro_beamb.patch
 
 # build, test and install
 ./configure --prefix=$CONDA_PREFIX/beamb --with-rave=$CONDA_PREFIX/rave
 make
 make test
 make install
-echo $CONDA_PREFIX/beamb/share/beamb/pybeamb > $CONDA_PREFIX/lib/python3.9/site-packages/beamb.pth
+echo $CONDA_PREFIX/beamb/share/beamb/pybeamb > $CONDA_PREFIX/lib/python3.11/site-packages/beamb.pth
 
 # activation script
 grep -l beamb ${CONDA_PREFIX}/etc/conda/activate.d/baltrad.sh

diff --git a/install/baltrad/install_baltrad_bropo.sh b/install/baltrad/install_baltrad_bropo.sh
@@ -12,6 +12,7 @@ export LD_LIBRARY_PATH=$CONDA_PREFIX/lib:$CONDA_PREFIX/hlhdf/lib:$CONDA_PREFIX/r
 cd $BALTRAD_INSTALL_ROOT/tmp
 git clone --depth 1 https://github.com/baltrad/bropo.git
 cd bropo/
+git apply $BALTRAD_INSTALL_ROOT/install/baltrad/fix_macro_bropo.patch
 
 # build, test and install
 ./configure --prefix=$CONDA_PREFIX/bropo \

diff --git a/install/baltrad/install_baltrad_hlhdf.sh b/install/baltrad/install_baltrad_hlhdf.sh
@@ -7,8 +7,9 @@ set +e
 
 # download
 cd $BALTRAD_INSTALL_ROOT/tmp
-git clone --depth=1 https://github.com/openradar/hlhdf.git
+git clone --depth=1 https://github.com/baltrad/hlhdf.git
 cd hlhdf/
+git apply $BALTRAD_INSTALL_ROOT/install/baltrad/fix_macro_type_hlhdf.patch
 
 # build, test and install
 ./configure --prefix=$CONDA_PREFIX/hlhdf \

diff --git a/install/baltrad/install_baltrad_rave.sh b/install/baltrad/install_baltrad_rave.sh
@@ -12,11 +12,12 @@ export LD_LIBRARY_PATH=$CONDA_PREFIX/lib:$CONDA_PREFIX/hlhdf/lib
 cd $BALTRAD_INSTALL_ROOT/tmp
 git clone --depth=1 https://github.com/baltrad/rave.git
 cd rave
-sed -i -e 's/import jprops/#import jprops/g' Lib/rave_bdb.py
-sed -i -e 's/import jprops/#import jprops/g' Lib/rave_dom_db.py
-sed -i -e 's/import jprops/#import jprops/g' Lib/rave_bdb.py
-sed -i -e 's/from baltrad.bdbclient/#from baltrad.bdbclient/g' Lib/rave_bdb.py
-sed -i -e 's/from keyczar import keyczar/#from keyczar import keyczar/g' Lib/BaltradFrame.py
+git apply $BALTRAD_INSTALL_ROOT/install/baltrad/fix_macro_rave.patch
+#sed -i -e 's/import jprops/#import jprops/g' Lib/rave_bdb.py
+#sed -i -e 's/import jprops/#import jprops/g' Lib/rave_dom_db.py
+#sed -i -e 's/import jprops/#import jprops/g' Lib/rave_bdb.py
+#sed -i -e 's/from baltrad.bdbclient/#from baltrad.bdbclient/g' Lib/rave_bdb.py
+#sed -i -e 's/from keyczar import keyczar/#from keyczar import keyczar/g' Lib/BaltradFrame.py
 # kmuehlbauer: This file is missing currently, so disabling
 # cp -p ~/binder/baltrad/fix_shebang.sh bin/.  # Copies in path to Python for conda
 

diff --git a/install/baltrad/install_baltrad_wrwp.sh b/install/baltrad/install_baltrad_wrwp.sh
@@ -15,6 +15,7 @@ mkdir $CONDA_PREFIX/rave/tmp
 cd $BALTRAD_INSTALL_ROOT/tmp
 git clone --depth 1 https://github.com/baltrad/baltrad-wrwp.git
 cd baltrad-wrwp/
+git apply $BALTRAD_INSTALL_ROOT/install/baltrad/fix_macro_wrwp.patch
 
 # build, test and install
 ./configure --prefix=$CONDA_PREFIX/baltrad-wrwp --with-rave=$CONDA_PREFIX/rave --with-blas=$CONDA_PREFIX/lib --with-cblas=$CONDA_PREFIX/lib --with-lapack=$CONDA_PREFIX/lib --with-lapacke=$CONDA_PREFIX/include,$CONDA_PREFIX/lib