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    6 repositories

    • proteingym_website

      Public
      JavaScript
      •1•1•0•0•Updated Dec 24, 2024Dec 24, 2024

    • ProteinNPT

      Public
      Official code repository for the paper "ProteinNPT: Improving Protein Property Prediction and Design with Non-Parametric Transformers"
      protein-design
      Python
      •
      MIT License
      •9•92•3•0•Updated Dec 23, 2024Dec 23, 2024

    • ProteinGym

      Public
      Official repository for the ProteinGym benchmarks
      benchmarkcomputational-biologyproteinprotein-designprotein-fitness
      HTML
      •
      MIT License
      •30•254•11•3•Updated Nov 1, 2024Nov 1, 2024

    • EVE

      Public
      Official repository for the paper "Large-scale clinical interpretation of genetic variants using evolutionary data and deep learning". Joint collaboration between the Marks lab and the OATML group.
      Python
      •
      MIT License
      •54•161•0•3•Updated Mar 16, 2024Mar 16, 2024

    • EVEscape

      Public
      Official repository for the paper "Learning from pre-pandemic data to forecast viral antibody escape"
      Python
      •
      MIT License
      •9•51•1•1•Updated Oct 11, 2023Oct 11, 2023

    • Tranception

      Public
      Official repository for the paper "Tranception: Protein Fitness Prediction with Autoregressive Transformers and Inference-time Retrieval"
      Python
      •
      MIT License
      •25•143•5•1•Updated Aug 24, 2023Aug 24, 2023