Repositories list

• Plotting_In_R

  Public
  Plotting in R training course

  HTML

  •6•0•5•1•Updated Dec 13, 2024Dec 13, 2024

• Intro_To_R_1Day

  Public
  Introduction to R training course

  HTML

  •2•3•4•0•Updated Dec 13, 2024Dec 13, 2024

• Intro_To_Python

  Public
  HTML

  •0•1•0•0•Updated Dec 11, 2024Dec 11, 2024

• popgen_dbsnp

  Public
  Rust

  •1•0•0•0•Updated Dec 10, 2024Dec 10, 2024

• IGV_course

  Public
  IGV training course

  HTML

  •4•1•1•0•Updated Dec 9, 2024Dec 9, 2024

• rockefelleruniversity.github.io

  Public
  HTML

  •4•6•0•7•Updated Nov 8, 2024Nov 8, 2024

• CarynHale_eLife_2021

  Public
  0•0•0•0•Updated Aug 21, 2024Aug 21, 2024

• SchneebergerPane_2024

  Public
  0•1•0•0•Updated Jul 17, 2024Jul 17, 2024

• scRNA-seq

  Public
  single-cell sequencing

  HTML

  •1•0•0•0•Updated Jul 15, 2024Jul 15, 2024

• GlossyBRC

  Public
  HTML

  •0•0•0•0•Updated Jun 21, 2024Jun 21, 2024

• .github

  Public
  0•0•0•0•Updated Jun 10, 2024Jun 10, 2024

• rowCorr

  Public
  C++

  •1•0•0•0•Updated May 17, 2024May 17, 2024

• CellRanger

  Public
  HTML

  •0•0•0•0•Updated Apr 15, 2024Apr 15, 2024

• H3R

  Public
  1•0•0•0•Updated Mar 19, 2024Mar 19, 2024

• Herper

  Public
  The Herper package is a simple toolset to install and manage Conda packages and environments from R.

  R

  •2•5•1•0•Updated Feb 29, 2024Feb 29, 2024

• ATRX_MPC_YF_NacevLab

  Public
  R

  •0•0•0•0•Updated Feb 15, 2024Feb 15, 2024

• SingleCell_Bootcamp

  Public
  HTML

  •0•0•0•0•Updated Dec 7, 2023Dec 7, 2023

• ATACseq_pseudotime

  Public
  Code used to perform pseudotime/regulon analyses on Matt's ATAC-seq data

  1•0•0•0•Updated Nov 20, 2023Nov 20, 2023

• OBiroi_Gene_Models

  Public
  HTML

  •0•0•0•0•Updated Nov 7, 2023Nov 7, 2023

• antNeuron_emptyDropt_doublet_rmAmbient

  Public
  Scripts for Anindita's ant neuron snRNA-Seq data processing

  HTML

  •0•0•0•0•Updated Nov 7, 2023Nov 7, 2023

• SEACR

  Public
  SEACR: Sparse Enrichment Analysis for CUT&RUN

  Shell

  •

  GNU General Public License v2.0

  •45•0•0•0•Updated Oct 5, 2023Oct 5, 2023

• Copap_Analysis

  Public
  Perl

  •

  GNU General Public License v3.0

  •0•0•0•0•Updated Sep 25, 2023Sep 25, 2023

• CLIPflexR

  Public
  New repo based on clipr from BRC/RU

  R

  •2•0•0•0•Updated Sep 20, 2023Sep 20, 2023

• ReferenceEnhancer

  Public
  R

  •

  Other

  •5•0•0•0•Updated Sep 8, 2023Sep 8, 2023

• batchtools

  Public
  Tools for computation on batch systems

  R

  •

  GNU Lesser General Public License v3.0

  •51•0•0•0•Updated Sep 1, 2023Sep 1, 2023

• RU_reproducibleR

  Public
  Reproducible R training course

  HTML

  •1•1•4•0•Updated Jul 18, 2023Jul 18, 2023

• Herper_Page

  Public
  HTML

  •2•0•0•0•Updated Apr 19, 2023Apr 19, 2023

• generecovery

  Public
  R

  •4•0•0•0•Updated Apr 12, 2023Apr 12, 2023

• IlluminaHumanMethylationEPICv2anno.20a1.hg38

  Public
  R

  •8•0•0•0•Updated Mar 22, 2023Mar 22, 2023

• profileplyr

  Public
  R

  •2•7•2•0•Updated Jan 18, 2023Jan 18, 2023