Repositories list

• rocrate-validator

  Public
  A Python package to validate RO-Crates

  Python

  •

  Apache License 2.0

  •5•7•3•0•Updated Oct 4, 2024Oct 4, 2024

• directory-scripts

  Public
  Repository for scripts to support the operations of the BBMRI-ERIC Directory

  Python

  •

  GNU Lesser General Public License v3.0

  •2•0•0•0•Updated Oct 4, 2024Oct 4, 2024

• cassandra-dali-plugin

  Public
  Cassandra plugin for NVIDIA DALI

  C++

  •

  Apache License 2.0

  •2•1•0•0•Updated Sep 30, 2024Sep 30, 2024

• openEHR-tool

  Public
  Tool for openEHR

  HTML

  •

  GNU General Public License v3.0

  •3•10•2•0•Updated Sep 24, 2024Sep 24, 2024

• life_monitor

  Public
  Workflow Sustainability Service

  testingworkflowsustainable-software+ 1monitoring

  Python

  •

  MIT License

  •4•4•16•1•Updated Sep 16, 2024Sep 16, 2024

• Beacon4Biobanks

  Public
  Beacon implementation for Biobanks Backends

  Python

  •

  Apache License 2.0

  •38•0•0•0•Updated Sep 3, 2024Sep 3, 2024

• lifemonitor-web

  Public
  Web App for the LifeMonitor Workflow Sustainability Service

  testingworkflowmonitoring+ 1sustainable-software

  SCSS

  •

  MIT License

  •2•0•2•0•Updated Sep 2, 2024Sep 2, 2024

• hl7apy

  Public
  Python library to parse, create and handle HL7 v2 messages.

  Python

  •

  MIT License

  •88•224•21•11•Updated Aug 7, 2024Aug 7, 2024

• VP-Onboarding-Doc

  Public
  Python

  •1•0•0•0•Updated Aug 5, 2024Aug 5, 2024

• workflow-testing-ro-crate

  Public
  RO-Crate profile related to the testing of computational workflows

  MIT License

  •0•0•0•0•Updated Jul 31, 2024Jul 31, 2024

• ro-terms

  Public
  Repository for creating new terms for Research Objects

  Python

  •11•0•0•0•Updated Jul 22, 2024Jul 22, 2024

• TO_OPENEHR_CONVERTER

  Public
  from different formats to openehr

  Python

  •1•0•0•0•Updated Jun 13, 2024Jun 13, 2024

• crc_cohort_modelling

  Public
  0•0•0•0•Updated Jun 10, 2024Jun 10, 2024

• molgenis-emx2

  Public
  MOLGENIS EMX2, the latest version of the MOLGENIS data platform.

  Vue

  •

  GNU Lesser General Public License v3.0

  •16•0•0•0•Updated Jun 3, 2024Jun 3, 2024

• negotiator-v3

  Public
  The BBMRI-ERIC Negotiator service for structured negotiation with biological resources dealing with human data and/or biological samples.

  Java

  •8•0•0•0•Updated May 29, 2024May 29, 2024

• molgenis

  Public
  MOLGENIS - for scientific data: management, exploration, integration and analysis.

  Java

  •

  GNU Lesser General Public License v3.0

  •99•0•0•0•Updated Apr 2, 2024Apr 2, 2024

• ifair-reg

  Public
  Repository with models and code of the FAIR metadata Registry of Biomedical Research in Sardinia

  CSS

  •0•0•0•0•Updated Mar 28, 2024Mar 28, 2024

• brain_qt5

  Public
  Brain is a software for 3D reconstruction and visualization of architectonic, neurophysiological and tract tracing data of primate cerebral cortex.

  C++

  •

  Other

  •0•0•0•0•Updated Mar 17, 2024Mar 17, 2024

• molgenis-app-biobank-explorer

  Public
  Vue application for the biobank explorer; A card detail view on BBMRI biobank - collection data

  JavaScript

  •

  GNU Lesser General Public License v3.0

  •20•0•0•0•Updated Mar 12, 2024Mar 12, 2024

• IsolaS2

  Public
  A standalone Web-App for quickly assessing the convenience of using Sentinel-2 MSI land-use data across a particular region or island

  JavaScript

  •

  GNU General Public License v3.0

  •0•0•0•0•Updated Mar 6, 2024Mar 6, 2024

• flatehr

  Public
  tool for generating openEHR compositions from other formats

  etlinteroperabilityhealthcare+ 2openehrdata-conversion

  Python

  •

  GNU General Public License v3.0

  •1•14•3•1•Updated Feb 8, 2024Feb 8, 2024

• DeepOmniStereoFromMonoIndoorPano

  Public
  Demo of novel deep synthesis and exploration of omnidirectional stereoscopic environments method.

  Python

  •

  MIT License

  •0•3•0•0•Updated Jan 12, 2024Jan 12, 2024

• pydoop

  Public
  A Python MapReduce and HDFS API for Hadoop

  Python

  •

  Apache License 2.0

  •59•237•23•0•Updated Jan 8, 2024Jan 8, 2024

• openlime

  Public
  Web-based, advanced images viewer (RTI, multispectral, BRDF, etc. )

  CSS

  •

  GNU General Public License v3.0

  •6•0•0•0•Updated Dec 21, 2023Dec 21, 2023

• hyperpeer-js

  Public
  Javascript module for implementing browser peers in applications based on Hyperpeer

  JavaScript

  •

  GNU General Public License v3.0

  •0•0•0•5•Updated Nov 28, 2023Nov 28, 2023

• repo2rocrate

  Public
  Generate a Workflow RO-Crate from a best-practice workflow repository

  workflowro-crate

  Python

  •

  Apache License 2.0

  •1•1•1•0•Updated Nov 16, 2023Nov 16, 2023

• DigitalPathologyPlatform

  Public
  CRS4 Digital Pathology Platform

  Python

  •

  MIT License

  •5•3•10•1•Updated Nov 14, 2023Nov 14, 2023

• fair-crcc-img-convert

  Public
  A Snakemake workflow for converting WSI from proprietary to open formats

  Python

  •

  GNU General Public License v3.0

  •0•0•0•2•Updated Oct 26, 2023Oct 26, 2023

• girder_worker

  Public
  Distributed task execution engine with Girder integration, developed by Kitware

  Python

  •

  Apache License 2.0

  •30•0•0•0•Updated Oct 19, 2023Oct 19, 2023

• slicer_cli_web

  Public
  A Girder plugin for exposing slicer execution model's CLI modules over the web

  JavaScript

  •

  Apache License 2.0

  •17•0•0•0•Updated Oct 17, 2023Oct 17, 2023