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@lamhda Laboratory of advanced methods for high-dimensional data analysis

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    25 repositories

    • COVID_SIRss

      Public
      Materials for the global analysis of COVID epidemics SIRss model
      Jupyter Notebook
      •0•0•0•0•Updated Nov 17, 2023Nov 17, 2023

    • HACK

      Public
      Hierarchical approach to Stabilised Independent Component Analysis
      Jupyter Notebook
      •
      GNU General Public License v3.0
      •3•0•0•0•Updated Dec 17, 2021Dec 17, 2021

    • scycle

      Public
      Cell cycle pseudotime in single-cell RNA-seq
      HTML
      •4•0•0•0•Updated Dec 6, 2021Dec 6, 2021

    • ElPiGraph.P-1

      Public
      Python implementation of the Elastic Principal Graph algorithm with multi-cpu and gpu support
      Python
      •
      GNU General Public License v3.0
      •10•0•0•0•Updated Oct 26, 2021Oct 26, 2021

    • scikit-dimension

      Public
      A Python package for intrinsic dimension estimation
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •16•0•0•0•Updated Dec 9, 2020Dec 9, 2020

    • ClinTrajan

      Public
      Finding trajectories, bifurcations and quantifying pseudotime in large clinical datasets
      Jupyter Notebook
      •
      GNU Lesser General Public License v2.1
      •3•0•0•0•Updated Oct 19, 2020Oct 19, 2020

    • Stabilized_ICA

      Public
      This repository proposes a python implementation of a stabilized ICA algorithm
      Jupyter Notebook
      •4•0•0•0•Updated Sep 10, 2020Sep 10, 2020

    • FisherSeparabilityAnalysis

      Public
      Data point cloud separability analysis based on linear Fisher discriminants
      Jupyter Notebook
      •4•0•0•0•Updated Jul 17, 2019Jul 17, 2019

    • VDAOEngine

      Public
      Java library for unsupervised data analysis methods, including modifications and extensions of PCA such as ICA, principal manifolds and graphs
      Java
      •
      GNU Lesser General Public License v3.0
      •2•0•0•0•Updated Dec 25, 2018Dec 25, 2018

    • ElPiGraph.R

      Public
      An R package to construct Elastic Principal Graphs
      HTML
      •
      GNU General Public License v3.0
      •9•0•0•0•Updated Dec 25, 2018Dec 25, 2018

    • PQSQ-DataApproximators

      Public
      Matlab and Java implementations of data analysis methods based on piece-wise quadratic approximation error (PQSQ)
      MATLAB
      •
      GNU Lesser General Public License v2.1
      •3•0•0•0•Updated Dec 25, 2018Dec 25, 2018

    • ElPiGraph.P

      Public
      Python implementation of the Elastic Principal Graphs (ElPiGraph) method
      Jupyter Notebook
      •9•0•0•0•Updated Dec 25, 2018Dec 25, 2018

    • PQSQ-regularized-regression

      Public
      The method of generalized regression regularization through PQSQ technique is presented. This approach includes lasso, elastic net and ridge regression as particular case.
      MATLAB
      •
      Creative Commons Zero v1.0 Universal
      •3•0•0•0•Updated Dec 16, 2018Dec 16, 2018

    • PQSQ-regression

      Public
      PostScript
      •
      Creative Commons Zero v1.0 Universal
      •1•0•0•0•Updated Dec 16, 2018Dec 16, 2018

    • SupervisedPCA

      Public
      Classification supervised PCA in accordance with Yehuda Koren and Liran Carmel
      MATLAB
      •
      Creative Commons Zero v1.0 Universal
      •3•0•0•0•Updated Dec 16, 2018Dec 16, 2018

    • ElMap

      Public
      Elastic map
      MATLAB
      •
      GNU General Public License v3.0
      •4•0•0•0•Updated Dec 16, 2018Dec 16, 2018

    • DataImputation

      Public
      Data imputation for visualisation
      MATLAB
      •
      GNU General Public License v3.0
      •2•0•0•0•Updated Dec 16, 2018Dec 16, 2018

    • Databases-and-code-for-l_p-functional-comparison

      Public
      Databases and code for l_p functional comparison
      MATLAB
      •
      GNU General Public License v3.0
      •1•0•0•0•Updated Dec 15, 2018Dec 15, 2018

    • EMG_data_for_gestures

      Public
      1•0•0•0•Updated Dec 7, 2018Dec 7, 2018

    • STREAM

      Public
      STREAM: Single-cell Trajectories Reconstruction, Exploration And Mapping of single-cell data
      Python
      •
      GNU Affero General Public License v3.0
      •48•0•0•0•Updated Nov 29, 2018Nov 29, 2018

    • ecg_segmentation

      Public
      разметка ЭКГ нейросетью
      Python
      •10•1•0•0•Updated Nov 24, 2018Nov 24, 2018

    • Elastic-principal-graphs

      Public
      Matlab implementation of the Elastic Principal Graphs (ElPiGraph) method
      MATLAB
      •
      GNU General Public License v3.0
      •6•0•0•0•Updated Nov 22, 2018Nov 22, 2018

    • Simple-model-of-complex-dynamics-in-neuronal-cultures

      Public
      1•0•0•0•Updated Nov 19, 2018Nov 19, 2018

    • trains_dataset

      Public
      database of train numbers
      1•0•0•0•Updated Nov 2, 2018Nov 2, 2018

    • Sinkhorn-Knopp-normalization

      Public
      MATLAB implementation of the normalization of a matrix by converting it to double stochastic matrix using Sinkhorn-Knopp algorithm from Sinkhorn, Richard, & Knopp, Paul. (1967). "Concerning nonnegative matrices and doubly stochastic matrices". Pacific J. Math. 21, 343–348
      MATLAB
      •2•0•0•0•Updated Oct 20, 2018Oct 20, 2018