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    20 repositories

    • fieldbioinformatics

      Public
      The ARTIC field bioinformatics pipeline
      Python
      •
      MIT License
      •87•0•0•0•Updated Jul 2, 2024Jul 2, 2024

    • mysql_dump_anonymizer

      Public
      Python
      •0•0•0•1•Updated Jun 27, 2024Jun 27, 2024

    • coverage

      Public
      Parse exome coverage per gene
      Go
      •
      MIT License
      •0•0•1•0•Updated Apr 11, 2024Apr 11, 2024

    • snvstory

      Public
      Rapid and accurate ancestry inference using SNVs.
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •8•0•0•0•Updated Apr 7, 2024Apr 7, 2024

    • vcf2df

      Public
      VCF to parquet converter
      Go
      •
      MIT License
      •0•1•0•0•Updated Nov 29, 2023Nov 29, 2023

    • vcfio

      Public
      VCF parsing library
      Go
      •0•0•0•0•Updated Nov 29, 2023Nov 29, 2023

    • manta

      Public
      Structural variant and indel caller for mapped sequencing data
      C++
      •
      GNU General Public License v3.0
      •154•0•0•0•Updated Dec 21, 2022Dec 21, 2022

    • bioinfo-praticas

      Public
      Prática para experimentar algumas ferramentas de desenvolvimento, no contexto de bioinfo.
      WDL
      •14•6•0•0•Updated Jun 16, 2022Jun 16, 2022

    • lbb-mendelics-2021

      Public
      Desafio Mendelics e Liga Brasileira de Bioinformática 2021
      2•5•0•0•Updated Nov 30, 2021Nov 30, 2021

    • developer-doc

      Public
      0•0•0•0•Updated Nov 4, 2021Nov 4, 2021

    • twobit

      Public archive
      Go library for reading/writing 2bit files
      Go
      •
      BSD 3-Clause "New" or "Revised" License
      •4•1•0•0•Updated Jul 23, 2021Jul 23, 2021

    • awesome

      Public archive
      0•1•0•0•Updated Jun 2, 2020Jun 2, 2020

    • go-npy

      Public archive
      Read matrices in numpy's npy format into Go
      Go
      •
      MIT License
      •0•2•0•0•Updated Oct 15, 2018Oct 15, 2018

    • bix

      Public archive
      tabix file access with golang using biogo machinery
      Go
      •
      MIT License
      •15•1•0•0•Updated Mar 28, 2018Mar 28, 2018

    • irelate

      Public archive
      Streaming relation (overlap, distance, KNN) of (any number of) sorted genomic interval sets. #golang
      Go
      •
      MIT License
      •10•1•0•0•Updated Dec 6, 2017Dec 6, 2017

    • vcfgo

      Public archive
      a golang library to read, write and manipulate files in the variant call format.
      Go
      •
      MIT License
      •18•1•0•0•Updated Dec 6, 2017Dec 6, 2017

    • vcf

      Public archive
      Variant Call Format parser library for Go
      Go
      •
      BSD 3-Clause "New" or "Revised" License
      •7•24•4•0•Updated Aug 11, 2017Aug 11, 2017

    • generator-angm

      Public archive
      Modular AngularJS Yeoman Generator to build large scale applications.
      JavaScript
      •24•1•0•0•Updated Feb 22, 2016Feb 22, 2016

    • garoa

      Public archive
      Extensible highly concurrent pipeline in Go
      Go
      •0•3•0•0•Updated Sep 16, 2015Sep 16, 2015

    • elastigo

      Public archive
      A Go (golang) based Elasticsearch client library.
      Go
      •
      Apache License 2.0
      •241•1•0•0•Updated Oct 21, 2014Oct 21, 2014