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    16 repositories

    • northomics.github.io

      Public
      lab website
      HTML
      •
      MIT License
      •0•0•0•0•Updated Sep 22, 2024Sep 22, 2024

    • spectra_entropy

      Public
      tool to calculate spectra_entropy to measure the complexity of ms spectra
      Python
      •
      MIT License
      •0•0•0•0•Updated Mar 4, 2024Mar 4, 2024

    • MetaDIA

      Public
      MIT License
      •0•0•0•0•Updated Mar 2, 2024Mar 2, 2024

    • RapidAIM_protocol_dataset

      Public
      Demo for data analysis for the RapidAIM 2.0 workflow
      0•0•0•0•Updated Aug 8, 2022Aug 8, 2022

    • MetaProClust-MS1

      Public
      MetaProClust-MS1: Gut microbiome metaproteomics clustering using rapid MS1 profiling
      R
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Jun 28, 2022Jun 28, 2022

    • pepFunk

      Public
      Peptide-centric functional enrichment tool
      metaproteomicsmicrobiome-analysisbioinformaticsshinyrstudio
      R
      •
      GNU General Public License v3.0
      •2•4•1•0•Updated Jun 1, 2022Jun 1, 2022

    • iMetaLab_paper

      Public
      Dataset_iMetaLab_paper
      HTML
      •0•0•0•0•Updated Mar 28, 2022Mar 28, 2022

    • iMetaShiny

      Public
      R
      •0•1•1•0•Updated Mar 11, 2022Mar 11, 2022

    • websites

      Public
      metalab websites related
      HTML
      •
      MIT License
      •0•0•2•0•Updated Mar 11, 2022Mar 11, 2022

    • rmetalab

      Public
      an R package for metaproteomics data analysis
      HTML
      •
      MIT License
      •0•0•0•0•Updated Mar 10, 2022Mar 10, 2022

    • metareport

      Public
      automatic report generation from metalab result
      R
      •
      MIT License
      •1•0•1•0•Updated Mar 10, 2022Mar 10, 2022

    • R_tutorials

      Public
      Introductory R tutorials for TMM3009 Rotations 2021 at University of Ottawa
      HTML
      •0•0•0•0•Updated Mar 24, 2021Mar 24, 2021

    • rmdocpu

      Public
      HTML
      •0•0•0•0•Updated Mar 23, 2021Mar 23, 2021

    • MetaProfiler

      Public
      Calculates the local false discovery rate of heavy peptide features and performs , taxonomic, functional, phylogenetic, and time series analysis of microbiome dynamic studies.
      R
      •0•3•0•0•Updated Nov 24, 2020Nov 24, 2020

    • metamap

      Public
      (First) Frontend Project - A data dashboard for taxonomy visualization @iMetaLab.ca
      JavaScript
      •2•0•0•0•Updated Jan 11, 2020Jan 11, 2020

    • bin

      Public
      Helper scripts used in analysis pipelines
      Python
      •0•0•0•0•Updated Nov 13, 2019Nov 13, 2019