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backports from master #4058

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wants to merge 7 commits into from
Closed

backports from master #4058

wants to merge 7 commits into from

Commits on Feb 28, 2024

  1. Python API: support writing Python numeric variables and lists (of on… 

    …e type) as ADIOS variables and attributes. Add extra tests for them and some in the bpWrite and bpReaderHeatMap2D examples.

- Add glue to accept lists and single python value for variables and attributes.
- Add test for lists and values (int, float and complex) to API tests.
- Turn on HDF5 Python test (serial version)
    @pnorbert @vicentebolea
    pnorbert authored and vicentebolea committed Feb 28, 2024
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  2. Add a static windows build to CI (ornladios#4037) 

    - Upstream EVpath, FFS and dill.
 - Actually add the CI
Co-authored-by: Vicente Bolea <vicente.bolea@gmail.com>
    @eisenhauer @vicentebolea
    eisenhauer authored and vicentebolea committed Feb 28, 2024
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  3. Add arguments to IO.AvailableAttributes() and io.available_attributes… 

    …() to get attributes of a specific variable.
    @pnorbert @vicentebolea
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  4. Return a 0-dim numpy array of size 1 when reading a scalar variable i… 

    …nstead of a 1-dim array of size 1. The difference can be seen with gray-scott gsplot, as step is printed now 10 instead of [10]. Same when running bpReaderHeatMap2D.py.
    @pnorbert @vicentebolea
    pnorbert authored and vicentebolea committed Feb 28, 2024
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  5. Add timeout parameter to stream.steps(). Necessary for controlling ti… 

    …meout in in situ processing. Also very useful for not being stuck forever in processing files that were not closed properly. Default is still infinity, which may not be the ideal setup for python scripts in practice. Usage:

    for _ in f.steps(timeout=1.0):
        ...
    @pnorbert @vicentebolea
    pnorbert authored and vicentebolea committed Feb 28, 2024
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  6. blosc: do not export blosc lib

    @vicentebolea
    vicentebolea committed Feb 28, 2024
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  7. Fix segfault when asking for BlocksInfo for a variable name that does… 

    … not exist. Return value is now empty dictionary. Also fix handling 1D arrays made from LocalValues. Now this code works for examples/basics/values/valuesWrite.cpp ProcessID:

    with adios2.Stream("values.bp", 'rra') as f:
        e = f.engine
        bi = e.blocks_info("ProcessID", 0)
        print(f"Blocks info = {bi}")
    @pnorbert @vicentebolea
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