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Bump sourmash from 0.17.2 to 0.18.0 #104

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@dependabot dependabot bot commented on behalf of github Dec 23, 2024

Bumps sourmash from 0.17.2 to 0.18.0.

Release notes

Sourced from sourmash's releases.

Second beta release before 1.0

No release notes provided.

Beta release before 1.0

The first tested, documented release.

Commits
  • 2325d8d MRG: update rust CHANGELOG in preparation for r0.18.0 (#3450)
  • 150967b MRG: add skipmer capacity to sourmash python layer via ffi (#3446)
  • 419eb73 Bump thiserror from 2.0.7 to 2.0.8 (#3448)
  • 5680efc MRG: add skipmers; switch to reading frame approach for translation, skipmers...
  • b69c960 Refactor: Use to_writer/from_reader across the codebase (#3443)
  • f4f5187 MRG: adjust Signature::name() to return Option\<String> instead of `filena...
  • 635ffc1 Bump thiserror from 2.0.6 to 2.0.7 (#3435)
  • a148a64 Bump proptest from 1.5.0 to 1.6.0 (#3437)
  • 8a9ae58 Bump roaring from 0.10.8 to 0.10.9 (#3438)
  • 61be936 Bump serde from 1.0.215 to 1.0.216 (#3436)
  • Additional commits viewable in compare view

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@dependabot dependabot bot added dependencies Pull requests that update a dependency file rust Pull requests that update Rust code labels Dec 23, 2024
@dependabot dependabot bot force-pushed the dependabot/cargo/sourmash-0.18.0 branch from 7f32c75 to ab8dc86 Compare December 23, 2024 12:57
Bumps [sourmash](https://github.com/sourmash-bio/sourmash) from 0.17.2 to 0.18.0.
- [Release notes](https://github.com/sourmash-bio/sourmash/releases)
- [Changelog](https://github.com/sourmash-bio/sourmash/blob/latest/doc/release.md)
- [Commits](sourmash-bio/sourmash@r0.17.2...r0.18.0)

---
updated-dependencies:
- dependency-name: sourmash
  dependency-type: direct:production
  update-type: version-update:semver-minor
...

Signed-off-by: dependabot[bot] <support@github.com>
@dependabot dependabot bot force-pushed the dependabot/cargo/sourmash-0.18.0 branch from ab8dc86 to 2759e7f Compare December 23, 2024 13:07
@ctb
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ctb commented Dec 23, 2024

This is gonna break 😆

We've added skipmers to sourmash, and I feel like there's an interesting opportunity here to take advantage of that in oxli, as well as maybe add other k-mer types... I hope to work on this over the next few weeks.

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