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BUG/PERF: MaskedArray.__setitem__ validation (#45404)
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jbrockmendel authored Jan 17, 2022
1 parent 2e5b05e commit 71c94af
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Showing 6 changed files with 104 additions and 22 deletions.
45 changes: 37 additions & 8 deletions pandas/core/arrays/masked.py
Original file line number Diff line number Diff line change
Expand Up @@ -55,6 +55,7 @@
from pandas.core.dtypes.inference import is_array_like
from pandas.core.dtypes.missing import (
array_equivalent,
is_valid_na_for_dtype,
isna,
notna,
)
Expand Down Expand Up @@ -233,17 +234,45 @@ def _coerce_to_array(
) -> tuple[np.ndarray, np.ndarray]:
raise AbstractMethodError(cls)

def __setitem__(self, key, value) -> None:
_is_scalar = is_scalar(value)
if _is_scalar:
value = [value]
value, mask = self._coerce_to_array(value, dtype=self.dtype)
def _validate_setitem_value(self, value):
"""
Check if we have a scalar that we can cast losslessly.
Raises
------
TypeError
"""
kind = self.dtype.kind
# TODO: get this all from np_can_hold_element?
if kind == "b":
if lib.is_bool(value):
return value

elif kind == "f":
if lib.is_integer(value) or lib.is_float(value):
return value

else:
if lib.is_integer(value) or (lib.is_float(value) and value.is_integer()):
return value
# TODO: unsigned checks

if _is_scalar:
value = value[0]
mask = mask[0]
raise TypeError(f"Invalid value '{value}' for dtype {self.dtype}")

def __setitem__(self, key, value) -> None:
key = check_array_indexer(self, key)

if is_scalar(value):
if is_valid_na_for_dtype(value, self.dtype):
self._mask[key] = True
else:
value = self._validate_setitem_value(value)
self._data[key] = value
self._mask[key] = False
return

value, mask = self._coerce_to_array(value, dtype=self.dtype)

self._data[key] = value
self._mask[key] = mask

Expand Down
3 changes: 3 additions & 0 deletions pandas/core/dtypes/missing.py
Original file line number Diff line number Diff line change
Expand Up @@ -648,6 +648,9 @@ def is_valid_na_for_dtype(obj, dtype: DtypeObj) -> bool:
elif dtype.kind in ["i", "u", "f", "c"]:
# Numeric
return obj is not NaT and not isinstance(obj, (np.datetime64, np.timedelta64))
elif dtype.kind == "b":
# We allow pd.NA, None, np.nan in BooleanArray (same as IntervalDtype)
return lib.is_float(obj) or obj is None or obj is libmissing.NA

elif dtype == _dtype_str:
# numpy string dtypes to avoid float np.nan
Expand Down
3 changes: 2 additions & 1 deletion pandas/io/stata.py
Original file line number Diff line number Diff line change
Expand Up @@ -593,7 +593,8 @@ def _cast_to_stata_types(data: DataFrame) -> DataFrame:
missing_loc = data[col].isna()
if missing_loc.any():
# Replace with always safe value
data.loc[missing_loc, col] = 0
fv = 0 if isinstance(data[col].dtype, _IntegerDtype) else False
data.loc[missing_loc, col] = fv
# Replace with NumPy-compatible column
data[col] = data[col].astype(data[col].dtype.numpy_dtype)
dtype = data[col].dtype
Expand Down
60 changes: 60 additions & 0 deletions pandas/tests/arrays/masked/test_indexing.py
Original file line number Diff line number Diff line change
@@ -0,0 +1,60 @@
import re

import numpy as np
import pytest

import pandas as pd


class TestSetitemValidation:
def _check_setitem_invalid(self, arr, invalid):
msg = f"Invalid value '{str(invalid)}' for dtype {arr.dtype}"
msg = re.escape(msg)
with pytest.raises(TypeError, match=msg):
arr[0] = invalid

with pytest.raises(TypeError, match=msg):
arr[:] = invalid

with pytest.raises(TypeError, match=msg):
arr[[0]] = invalid

# FIXME: don't leave commented-out
# with pytest.raises(TypeError):
# arr[[0]] = [invalid]

# with pytest.raises(TypeError):
# arr[[0]] = np.array([invalid], dtype=object)

# Series non-coercion, behavior subject to change
ser = pd.Series(arr)
with pytest.raises(TypeError, match=msg):
ser[0] = invalid
# TODO: so, so many other variants of this...

_invalid_scalars = [
1 + 2j,
"True",
"1",
"1.0",
pd.NaT,
np.datetime64("NaT"),
np.timedelta64("NaT"),
]

@pytest.mark.parametrize(
"invalid", _invalid_scalars + [1, 1.0, np.int64(1), np.float64(1)]
)
def test_setitem_validation_scalar_bool(self, invalid):
arr = pd.array([True, False, None], dtype="boolean")
self._check_setitem_invalid(arr, invalid)

@pytest.mark.parametrize("invalid", _invalid_scalars + [True, 1.5, np.float64(1.5)])
def test_setitem_validation_scalar_int(self, invalid, any_int_ea_dtype):
arr = pd.array([1, 2, None], dtype=any_int_ea_dtype)
self._check_setitem_invalid(arr, invalid)

@pytest.mark.parametrize("invalid", _invalid_scalars + [True])
def test_setitem_validation_scalar_float(self, invalid, float_ea_dtype):
arr = pd.array([1, 2, None], dtype=float_ea_dtype)
self._check_setitem_invalid(arr, invalid)
4 changes: 1 addition & 3 deletions pandas/tests/frame/indexing/test_indexing.py
Original file line number Diff line number Diff line change
Expand Up @@ -1240,12 +1240,10 @@ def test_setting_mismatched_na_into_nullable_fails(

msg = "|".join(
[
r"int\(\) argument must be a string, a bytes-like object or a "
"(real )?number, not 'NaTType'",
r"timedelta64\[ns\] cannot be converted to an? (Floating|Integer)Dtype",
r"datetime64\[ns\] cannot be converted to an? (Floating|Integer)Dtype",
"object cannot be converted to a FloatingDtype",
"'values' contains non-numeric NA",
r"Invalid value '.*' for dtype (U?Int|Float)\d{1,2}",
]
)
with pytest.raises(TypeError, match=msg):
Expand Down
11 changes: 1 addition & 10 deletions pandas/tests/frame/indexing/test_where.py
Original file line number Diff line number Diff line change
Expand Up @@ -907,16 +907,7 @@ def test_where_nullable_invalid_na(frame_or_series, any_numeric_ea_dtype):

mask = np.array([True, True, False], ndmin=obj.ndim).T

msg = "|".join(
[
r"datetime64\[.{1,2}\] cannot be converted to an? (Integer|Floating)Dtype",
r"timedelta64\[.{1,2}\] cannot be converted to an? (Integer|Floating)Dtype",
r"int\(\) argument must be a string, a bytes-like object or a number, "
"not 'NaTType'",
"object cannot be converted to a FloatingDtype",
"'values' contains non-numeric NA",
]
)
msg = r"Invalid value '.*' for dtype (U?Int|Float)\d{1,2}"

for null in tm.NP_NAT_OBJECTS + [pd.NaT]:
# NaT is an NA value that we should *not* cast to pd.NA dtype
Expand Down

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