Merge pull request #145 from effigies/dependabot #7
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| # This workflow runs the full set of of indexed_gzip | |
| # unit tests on a range of different versions of Python, | |
| # and on different operating systems and architectures. | |
| # It is run on pushes to the main branch. | |
| on: | |
| push: | |
| branches: | |
| - main | |
| defaults: | |
| run: | |
| shell: bash | |
| jobs: | |
| # Quick tests run on all OSes/python versions | |
| test-indexed_gzip: | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| matrix: | |
| os: ["ubuntu-latest", "macos-latest", "windows-latest"] | |
| python-version: ["3.8", "3.9", "3.10", "3.11", "3.12"] | |
| extra-args: ["", "--concat"] | |
| exclude: | |
| - os: windows-latest | |
| python-version: 3.12 | |
| env: | |
| PLATFORM: ${{ matrix.os }} | |
| PYTHON_VERSION: ${{ matrix.python-version }} | |
| TEST_SUITE: "not (slow_test or zran_test)" | |
| EXTRA_ARGS: ${{ matrix.extra-args }} | |
| ENV_DIR: ./test.env | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Create test environment | |
| run: bash ./.ci/create_test_env.sh "$ENV_DIR" | |
| - name: Log test environment | |
| run: | | |
| source ./.ci/activate_env.sh "$ENV_DIR" | |
| python -V | |
| pip freeze | |
| - name: Download zlib | |
| if: ${{ matrix.os == 'windows-latest' }} | |
| run: bash ./.ci/download_zlib.sh | |
| - name: Build indexed_gzip | |
| run: bash ./.ci/build_dev_indexed_gzip.sh "$ENV_DIR" | |
| - name: Run tests | |
| run: bash ./.ci/run_tests.sh "$ENV_DIR" | |
| # Slow indexed_gzip tests run on all OSes | |
| test-indexed_gzip-slow: | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| matrix: | |
| include: | |
| - os: "windows-latest" | |
| test-suite: "indexed_gzip_test and slow_test" | |
| extra-args: "" | |
| - os: "macos-latest" | |
| test-suite: "indexed_gzip_test and slow_test" | |
| extra-args: "" | |
| - os: "ubuntu-latest" | |
| test-suite: "indexed_gzip_test and slow_test" | |
| extra-args: "" | |
| nelems: "" | |
| - os: "windows-latest" | |
| test-suite: "indexed_gzip_test and slow_test" | |
| extra-args: "--concat" | |
| nelems: "" | |
| - os: "macos-latest" | |
| test-suite: "indexed_gzip_test and slow_test" | |
| extra-args: "--concat" | |
| nelems: "" | |
| - os: "ubuntu-latest" | |
| test-suite: "indexed_gzip_test and slow_test" | |
| extra-args: "--concat" | |
| nelems: "" | |
| # mmap test errors under windos (I think because | |
| # memory needs to be alliocated for the mmap, but | |
| # there's not enough RAM) | |
| - os: "macos-latest" | |
| test-suite: "indexed_gzip_test" | |
| extra-args: "--use_mmap" | |
| nelems: "805306368" | |
| - os: "ubuntu-latest" | |
| test-suite: "indexed_gzip_test" | |
| extra-args: "--use_mmap" | |
| nelems: "805306368" | |
| env: | |
| PLATFORM: ${{ matrix.os }} | |
| PYTHON_VERSION: 3.10 | |
| TEST_SUITE: ${{ matrix.test-suite }} | |
| EXTRA_ARGS: ${{ matrix.extra-args }} | |
| NELEMS: ${{ matrix.nelems }} | |
| ENV_DIR: ./test.env | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Set up Python | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: "3.10" | |
| - name: Create test environment | |
| run: bash ./.ci/create_test_env.sh "$ENV_DIR" | |
| - name: Log test environment | |
| run: | | |
| source ./.ci/activate_env.sh "$ENV_DIR" | |
| python -V | |
| pip freeze | |
| - name: Download zlib | |
| if: ${{ matrix.os == 'windows-latest' }} | |
| run: bash ./.ci/download_zlib.sh | |
| - name: Build indexed_gzip | |
| run: bash ./.ci/build_dev_indexed_gzip.sh "$ENV_DIR" | |
| - name: Run tests | |
| run: bash ./.ci/run_tests.sh "$ENV_DIR" | |
| # zran tests run only on ubuntu | |
| test-zran: | |
| runs-on: "ubuntu-latest" | |
| strategy: | |
| matrix: | |
| include: | |
| - niters: "5000" | |
| nelems: "rnd_1000000" | |
| test-pattern: "not test_readbuf_spacing_sizes and not test_seek_then_read_block" | |
| extra-args: "" | |
| - niters: "5000" | |
| nelems: "rnd_1000000" | |
| test-pattern: "not test_readbuf_spacing_sizes and not test_seek_then_read_block" | |
| extra-args: "--concat" | |
| - niters: "5000" | |
| nelems: "rnd_1000000" | |
| test-pattern: "test_readbuf_spacing_sizes" | |
| extra-args: "" | |
| - niters: "5000" | |
| nelems: "rnd_1000000" | |
| test-pattern: "test_readbuf_spacing_sizes" | |
| extra-args: "--concat" | |
| - niters: "5000" | |
| nelems: "rnd_1000000" | |
| test-pattern: "test_seek_then_read_block" | |
| extra-args: "" | |
| - niters: "5000" | |
| nelems: "rnd_1000000" | |
| test-pattern: "test_seek_then_read_block" | |
| extra-args: "--concat" | |
| - niters: "5000" | |
| nelems: "rnd_2000000" | |
| test-pattern: "not test_readbuf_spacing_sizes and not test_seek_then_read_block" | |
| extra-args: "" | |
| - niters: "5000" | |
| nelems: "rnd_2000000" | |
| test-pattern: "not test_readbuf_spacing_sizes and not test_seek_then_read_block" | |
| extra-args: "--concat" | |
| - niters: "500" | |
| nelems: "rnd_2000000" | |
| test-pattern: "test_readbuf_spacing_sizes" | |
| extra-args: "" | |
| - niters: "500" | |
| nelems: "rnd_2000000" | |
| test-pattern: "test_readbuf_spacing_sizes" | |
| extra-args: "--concat" | |
| - niters: "500" | |
| nelems: "rnd_2000000" | |
| test-pattern: "test_seek_then_read_block" | |
| extra-args: "" | |
| - niters: "500" | |
| nelems: "rnd_2000000" | |
| test-pattern: "test_seek_then_read_block" | |
| extra-args: "--concat" | |
| - niters: "1000" | |
| nelems: "rnd_800000000" | |
| extra-args: "--use_mmap" | |
| test-pattern: "not test_readbuf_spacing_sizes and not test_seek_then_read_block" | |
| - niters: "1000" | |
| nelems: "rnd_800000000" | |
| extra-args: "--use_mmap --concat" | |
| test-pattern: "not test_readbuf_spacing_sizes and not test_seek_then_read_block" | |
| - niters: "50" | |
| nelems: "rnd_800000000" | |
| extra-args: "--use_mmap" | |
| test-pattern: "test_readbuf_spacing_sizes" | |
| - niters: "50" | |
| nelems: "rnd_800000000" | |
| extra-args: "--use_mmap --concat" | |
| test-pattern: "test_readbuf_spacing_sizes" | |
| - niters: "25" | |
| nelems: "rnd_800000000" | |
| extra-args: "--use_mmap" | |
| test-pattern: "test_seek_then_read_block" | |
| - niters: "25" | |
| nelems: "rnd_800000000" | |
| extra-args: "--use_mmap --concat" | |
| test-pattern: "test_seek_then_read_block" | |
| env: | |
| PLATFORM: ${{ matrix.os }} | |
| PYTHON_VERSION: "3.10" | |
| TEST_SUITE: "zran_test" | |
| TEST_PATTERN: ${{ matrix.test-pattern }} | |
| EXTRA_ARGS: ${{ matrix.extra-args }} | |
| NELEMS: ${{ matrix.nelems }} | |
| NITERS: ${{ matrix.niters }} | |
| ENV_DIR: ./test.env | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Set up Python | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: "3.10" | |
| - name: Create test environment | |
| run: bash ./.ci/create_test_env.sh "$ENV_DIR" | |
| - name: Log test environment | |
| run: | | |
| source ./.ci/activate_env.sh "$ENV_DIR" | |
| python -V | |
| pip freeze | |
| - name: Build indexed_gzip | |
| run: bash ./.ci/build_dev_indexed_gzip.sh "$ENV_DIR" | |
| - name: Run tests | |
| run: bash ./.ci/run_tests.sh "$ENV_DIR" |