Update the docs

docs/api/cooler.rst

@@ -27,4 +27,4 @@ Cooler API
    .. automethod:: chromosomes
    .. automethod:: finalize
    .. automethod:: path
-   .. automethod:: resolutions
+   .. automethod:: resolution

src/file.cpp

@@ -322,6 +322,8 @@ void declare_file_class(nb::module_ &m) {
            "Check whether a given normalization is available.");
   file.def("weights", &file::weights, nb::arg("name"), nb::arg("divisive") = true,
            "Fetch the balancing weights for the given normalization method.",
+           nb::sig("def weights(self, name: str, divisive: bool = True) -> "
+                   "numpy.ndarray[float]"),
            nb::rv_policy::take_ownership);
   file.def(
       "weights", &file::weights_df, nb::arg("names"), nb::arg("divisive") = true,

src/hic_file_writer.cpp

@@ -196,7 +196,7 @@ void HiCFileWriter::bind(nb::module_ &m) {
 
   writer.def("add_pixels", &hictkpy::HiCFileWriter::add_pixels,
              nb::call_guard<nb::gil_scoped_release>(),
-             nb::sig("def add_pixels(self, pixels: pd.DataFrame) -> None"), nb::arg("pixels"),
+             nb::sig("def add_pixels(self, pixels: pandas.DataFrame) -> None"), nb::arg("pixels"),
              "Add pixels from a pandas DataFrame containing pixels in COO or BG2 format (i.e. "
              "either with columns=[bin1_id, bin2_id, count] or with columns=[chrom1, start1, end1, "
              "chrom2, start2, end2, count].");

src/singlecell_file.cpp

@@ -122,7 +122,7 @@ void declare_singlecell_file_class(nb::module_& m) {
                  nb::rv_policy::take_ownership);
   scell_file.def("cells", &singlecell_file::get_cells, "Get the list of available cells.",
                  nb::rv_policy::move);
-  scell_file.def("__getitem__", &singlecell_file::getitem,
+  scell_file.def("__getitem__", &singlecell_file::getitem, nb::arg("cell_id"),
                  "Open the Cooler file corresponding to the cell ID given as input.",
                  nb::rv_policy::move);
 }