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Fix clone with relative restart paths #456

Fix clone with relative restart paths

Fix clone with relative restart paths #456

Workflow file for this run

# Run CI tests
name: CI
# Controls when the action will run.
on:
# Triggers the workflow on push or pull request events but only for the master branch
push:
branches: [ master ]
pull_request:
branches: [ master ]
# Allows you to run this workflow manually from the Actions tab
workflow_dispatch:
env:
PY_VERSION: 3.11
# A workflow run is made up of one or more jobs that can run sequentially or in parallel
jobs:
pypa-build:
name: PyPA build
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v4
- uses: actions/setup-python@v5
with:
python-version: ${{ env.PY_VERSION }}
cache: 'pip' # caching pip dependencies
- run: |
python3 -m pip install --upgrade build && python3 -m build
- uses: actions/upload-artifact@v3
with:
path: ./dist
conda-build:
name: Conda Build
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v4
- name: Setup conda environment
uses: conda-incubator/setup-miniconda@11b562958363ec5770fef326fe8ef0366f8cbf8a # v3.0.1
with:
miniconda-version: "latest"
python-version: ${{ env.PY_VERSION }}
environment-file: conda/environment.yml
auto-update-conda: false
auto-activate-base: false
show-channel-urls: true
- name: Run conda build
shell: bash -el {0}
run: conda build . --no-anaconda-upload
tests:
name: Tests
runs-on: ubuntu-latest
# Run the job for different versions of python
strategy:
matrix:
python-version: ["3.10", "3.11", "3.12"]
# Steps represent a sequence of tasks that will be executed as part of the job
steps:
# Checks-out repository code
- name: Checkout code
uses: actions/checkout@v4
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v5
with:
python-version: ${{ matrix.python-version }}
cache: 'pip' # caching pip dependencies
- name: Install dependencies
run: pip install -r test/requirements_test.txt
- name: Install payu
run: pip install .
- name: Check payu installed correctly
run: payu list
- name: Lint
run: pylint --extension-pkg-whitelist=netCDF4 --ignored-modules=backports -E payu
- name: Run tests
run: |
PYTHONPATH=. pytest --cov=payu -s test;
- name: Coveralls
uses: AndreMiras/coveralls-python-action@65c1672f0b8a201702d86c81b79187df74072505
with:
parallel: true
- name: Make docs
run: cd docs && make html
coveralls_finish:
name: Coveralls Finished
needs: tests
runs-on: ubuntu-latest
steps:
- uses: AndreMiras/coveralls-python-action@65c1672f0b8a201702d86c81b79187df74072505
with:
parallel-finished: true