resolve notes from devtools::check()

phac-nml-phrsd · Sep 28, 2023 · e4a1145 · e4a1145
1 parent 364c4cb
commit e4a1145
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diff --git a/DESCRIPTION b/DESCRIPTION
@@ -1,5 +1,5 @@
 Package: EPACmodel
-Title: Use the Early Pandemic Age-structured Compartmental (EPAC) model.
+Title: Use the Early Pandemic Age-structured Compartmental (EPAC) model
 Version: 1.1.0
 Authors@R: c( 
     person("Irena", "Papst", , "irena.papst@phac-aspc.gc.ca", role = c("aut", "cre")),

diff --git a/R/globals.R b/R/globals.R
@@ -1 +1,6 @@
-utils::globalVariables(c("time", "value"))
+utils::globalVariables(c(
+  "time", "value",
+  "age", "age_group",
+  "age_susceptible", "age_infectious",
+  "count"
+))
diff --git a/R/helpers_five-year-age-groups.R b/R/helpers_five-year-age-groups.R
@@ -54,11 +54,11 @@ mk_contact_pars <- function(
         names_to = "age_infectious"
       )
       |> dplyr::mutate(dplyr::across(
-        starts_with("age"),
+        dplyr::starts_with("age"),
         \(x) as.numeric(x)
       ))
       |> dplyr::mutate(dplyr::across(
-        starts_with("age"),
+        dplyr::starts_with("age"),
         \(x) cut(x, breaks = c(age.group.lower, Inf),
                  include.lowers = TRUE, right = FALSE)
       ))