Validate Variation object embedded in the the Phenopacket Schema
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Signed-off-by: Daniel Danis <daniel.gordon.danis@protonmail.com>
Signed-off-by: Daniel Danis <daniel.gordon.danis@protonmail.com>
ielis
changed the title
Variation struct.Variation object embedded in the the Phenopacket Schema
Signed-off-by: Daniel Danis <daniel.gordon.danis@protonmail.com>
Signed-off-by: Daniel Danis <daniel.gordon.danis@protonmail.com>
…ation error. Absence of a `oneof` field in `Variation` leads to an error. Signed-off-by: Daniel Danis <daniel.gordon.danis@protonmail.com>
pnrobinson
reviewed
Nov 9, 2022
...t-tools-cli/src/main/java/org/phenopackets/phenopackettools/cli/examples/Retinoblastoma.java
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Create a JSON schema for validation of
Variationobject embedded in the Phenopacket Schema.The validation ensures presence of a field from a
oneofgroup and absence of any additional attributes/properties within theVariationobject sub-hierarchy.The tests are at lines 227-254 of
phenopacket-tools-validator-jsonschema/src/test/java/org/phenopackets/phenopackettools/validator/jsonschema/JsonSchemaValidationWorkflowRunnerTest.java.