Skip to content

Issues: privefl/bigsnpr

Installation issue: OS X "-lgfortran" and "-lquadmath" errors
#6 by DrK-Lo was closed Sep 13, 2018
Closed 5
Handling missing values in SNP matrix
#49 by naglemi was closed Mar 9, 2020
Closed 13
African LD reference
#305 by rameez500 was closed Mar 1, 2022
Closed 5
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

29 Open 455 Closed
29 Open 455 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Issues list

Use the genotype matrix for another library
#522 opened Nov 19, 2024 by garyzhubc
Data file format
#519 opened Oct 27, 2024 by vdvornyk1
3
LD Metrics Using 1000 Genomes and Beta Values Returning NA
#518 opened Oct 23, 2024 by Taewoong-Ha
4
Some failures in tests [ FAIL 13 | WARN 0 | SKIP 1 | PASS 174 ]
#515 opened Sep 21, 2024 by barracuda156
5
How to get sample ids out of a bigsnpr object?
#514 opened Aug 22, 2024 by garyzhubc
1
Issue with the loop in the code
#513 opened Aug 1, 2024 by khujithrajueni
3
How to deal "missing value error" on imputed genotypes data
#511 opened Jul 30, 2024 by panqinglzmc
7
About the INFO value in Quality Control of GWAS summary statistics
#509 opened Jul 25, 2024 by koujiaodahan
2
how to handle ldsc with negative h2 value?
#506 opened Jul 5, 2024 by SangGold
2
Should error when using a correlation matrix with NA / NaNs values enhancement good for first PR
#498 opened May 22, 2024 by privefl
Error in step #3 of projecting PC scores on new data
#496 opened Apr 30, 2024 by ozandikilitas
16
Handle insertions/deletions coded as I/D in snp_match() enhancement
#494 opened Apr 18, 2024 by privefl
2
Would it be possible to release 1.12.6?
#493 opened Apr 16, 2024 by stefcardinale
1
Imputation for haploid organisms
#485 opened Mar 18, 2024 by adomron24
2
How to get the avaliable snp list with corrected beta used in LDpred2-auto module
#481 opened Feb 29, 2024 by koujiaodahan
2
LDpred2-auto for EWAS
#473 opened Jan 15, 2024 by KristofferSandas
31
See if could make snp_colstats() faster
#470 opened Dec 20, 2023 by privefl
Using bigsnpr C++ headers in my package good for first PR
#460 opened Nov 1, 2023 by kristjanmoore
5
Unusually High h2est Values: Exceeding 1 and Reaching up to 2 or 3
#420 opened Apr 12, 2023 by PEWilliamZhou
27
Simulating multiple genetically correlated phenotypes feature request
#419 opened Apr 10, 2023 by fmorgante
7
Enable parallelism in big_counts() enhancement good for first PR
#403 opened Jan 13, 2023 by privefl
Implement bed_(c)prodMat() good for first PR
#391 opened Nov 25, 2022 by privefl
1
See if can make snp_grid_clumping() faster enhancement
#382 opened Oct 24, 2022 by privefl
1
Implement product that handles missing values feature request
#298 opened Jan 19, 2022 by privefl
1
Warn when there are too many missing values to impute feature request good for first PR
#296 opened Jan 17, 2022 by privefl
ProTip! What’s not been updated in a month: updated:<2024-10-19.