This repository contains custom code used for single cell RNA-sequencing analysis and visualization in Pryszlak M*, Wiggans M*, et al., Cell Reports (2021).
Single cell RNA-sequencing datasets used in this study were obtained from Richards LM et al., Nature Cancer, 2021. Raw sequencing data is available through the European Genome-Phenome Archive (EGAS00001004656; https://www.ebi.ac.uk/ega/studies/) repository. Processed single cell RNA-sequencing data are publically available through the Broad Institute Single-Cell Portal (https://singlecell.broadinstitute.org/single_cell/study/SCP503) and CReSCENT (https://crescent.cloud).
Laura Richards (lauram.richards@mail.utoronto.ca)
Drs. Trevor Pugh (trevor.pugh@utoronto.ca) & Bret Pearson (bret.pearson@sickkids.ca)